Cu-Induced self-assembly and amyloid formation of a cyclic ,-α-peptide: structure and function

• Published in: Physical chemistry chemical physics : PCCP Vol. 24; no. 11; pp. 6699 - 6715
• Main Authors: Klose, Daniel, Vemulapalli, Sahithya Phani Babu, Richman, Michal, Rudnick, Safra, Aisha, Vered, Abayev, Meital, Chemerovski, Marina, Shviro, Meital, Zitoun, David, Majer, Katharina, Wili, Nino, Goobes, Gil, Griesinger, Christian, Jeschke, Gunnar, Rahimipour, Shai
• Format: Journal Article
• Published: 16.03.2022
• ISSN: 1463-9076; 1463-9084
• DOI: 10.1039/d1cp05415e

In a wide spectrum of neurodegenerative diseases, self-assembly of pathogenic proteins to cytotoxic intermediates is accelerated by the presence of metal ions such as Cu 2+ . Only low concentrations of these early transient oligomeric intermediates are present in a mixture of species during fibril formation, and hence information on the extent of structuring of these oligomers is still largely unknown. Here, we investigate dimers as the first intermediates in the Cu 2+ -driven aggregation of a cyclic d , l -α-peptide architecture. The unique structural and functional properties of this model system recapitulate the self-assembling properties of amyloidogenic proteins including β-sheet conformation and cross-interaction with pathogenic amyloids. We show that a histidine-rich cyclic d , l -α-octapeptide binds Cu 2+ with high affinity and selectivity to generate amyloid-like cross-β-sheet structures. By taking advantage of backbone amide methylation to arrest the self-assembly at the dimeric stage, we obtain structural information and characterize the degree of local order for the dimer. We found that, while catalytic amounts of Cu 2+ promote aggregation of the peptide to fibrillar structures, higher concentrations dose-dependently reduce fibrillization and lead to formation of spherical particles, showing self-assembly to different polymorphs. For the initial self-assembly step to the dimers, we found that Cu 2+ is coordinated on average by two histidines, similar to self-assembled peptides, indicating that a similar binding interface is perpetuated during Cu 2+ -driven oligomerization. The dimer itself is found in heterogeneous conformations that undergo dynamic exchange, leading to the formation of different polymorphs at the initial stage of the aggregation process. The self-assembly of the cyclic d , l -α-peptide generates amyloid-like structures and this process can be arrested at the level of the dimer giving insights into early-stage aggregation and polymorphism.