Multiscale analysis of three independent Alzheimer’s cohorts reveals disruption of molecular, genetic, and clinical networks by Human herpesvirus

• Published in: Neuron (Cambridge, Mass.) Vol. 99; no. 1; pp. 64 - 82.e7
• Main Authors: Readhead, Ben, Haure-Mirande, Jean-Vianney, Funk, Cory C., Richards, Matthew A., Shannon, Paul, Haroutunian, Vahram, Sano, Mary, Liang, Winnie S., Beckmann, Noam D., Price, Nathan D., Reiman, Eric M., Schadt, Eric E., Ehrlich, Michelle E., Gandy, Sam, Dudley, Joel T.
• Format: Journal Article
• Language: English
• Published: 21.06.2018
• ISSN: 0896-6273; 1097-4199
• DOI: 10.1016/j.neuron.2018.05.023

Investigators have long suspected that pathogenic microbes might contribute to the onset and progression of Alzheimer’s disease (AD) although definitive evidence has not been presented. Whether such findings represent a causal contribution, or reflect opportunistic passengers of neurodegeneration is also difficult to resolve. We constructed multiscale networks of the late onset AD-associated virome, integrating genomic, transcriptomic, proteomic, and histopathological data across four brain regions from human postmortem tissue. We observed increased human herpesvirus 6A (HHV-6A) and human herpesvirus 7 (HHV-7) from subjects with AD compared with controls. These results were replicated in two additional, independent and geographically dispersed cohorts. We observed regulatory relationships linking viral abundance and modulators of APP metabolism, including induction of APBB2 , APPBP2 , BIN1 , BACE1 , CLU , PICALM , and PSEN1 by HHV-6A. This study elucidates networks linking molecular, clinical, and neuropathological features with viral activity and is consistent with viral activity constituting a general feature of AD. Readhead et al. construct multiscale networks of the late onset Alzheimer’s disease (AD) associated virome, and observe pathogenic regulation of molecular, clinical and neuropathological networks by several common viruses, particularly human herpesvirus 6A and human herpesvirus 7.