A New Middle Path Approach For Alignements In Blast
This paper deals with a new middle path approach developed for reducing alignment calculations in BLAST algorithm. This is a new step which is introduced in BLAST algorithm in between the ungapped and gapped alignments. This step of middle path approach between the ungapped and gapped alignments red...
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Published in | arXiv.org |
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Main Authors | , , |
Format | Paper |
Language | English |
Published |
Ithaca
Cornell University Library, arXiv.org
27.09.2012
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Subjects | |
Online Access | Get full text |
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Summary: | This paper deals with a new middle path approach developed for reducing alignment calculations in BLAST algorithm. This is a new step which is introduced in BLAST algorithm in between the ungapped and gapped alignments. This step of middle path approach between the ungapped and gapped alignments reduces the number of sequences going for gapped alignment. This results in the improvement in speed for alignment up to 30 percent. |
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ISSN: | 2331-8422 |