Estimating robustness of the tileShuffle method with repeated probes

In this paper the TileShuffle method is evaluated as a search method for candidate lncRNAs at 8q24.2. The method is run on three microarrays. Microarrays which all contained the same sample and repeated copies of tiled probes. This allows the coherence of the selection method within and between micr...

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Published inarXiv.org
Main Authors Lund, Sigrun Helga, Sigurdsson, Asgeir, Gudjonsson, Sigurjon Axel, Gudmundsson, Julius, Gudbjartsson, Daniel Fannar, Rafnar, Thorunn, Stefansson, Kari, Stefansson, Gunnar
Format Paper
LanguageEnglish
Published Ithaca Cornell University Library, arXiv.org 12.03.2014
Subjects
Computer simulation
Monte Carlo simulation
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Summary:In this paper the TileShuffle method is evaluated as a search method for candidate lncRNAs at 8q24.2. The method is run on three microarrays. Microarrays which all contained the same sample and repeated copies of tiled probes. This allows the coherence of the selection method within and between microarrays to be estimated by Monte Carlo simulations on the repeated probes.
ISSN:2331-8422