Method for identifying nucleotide sequence, method for acquiring secondary structure of nucleic acid molecule, apparatus for identifying nucleotide sequence, apparatus for acquiring secondary structure of nucleic acid molecule, program for identifying nucleotide sequence, and program for acquiring secondary structure of nucleic acid molecule

The object of the present invention is to provide a method for identifying a nucleotide sequence necessary for expressing affinity for a target substance with respect to a nucleotide sequence of a nucleic acid molecule such as an aptamer having such affinity for the target substance, based on simila...

Full description

Saved in:
Bibliographic Details
Main Author AKITOMI JOU
Format Patent
LanguageEnglish
Published 12.04.2016
Subjects
CALCULATING
COMPUTING
COUNTING
ELECTRIC DIGITAL DATA PROCESSING
INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTEDFOR SPECIFIC APPLICATION FIELDS
PHYSICS
Online AccessGet full text

Cover

More Information
Summary:The object of the present invention is to provide a method for identifying a nucleotide sequence necessary for expressing affinity for a target substance with respect to a nucleotide sequence of a nucleic acid molecule such as an aptamer having such affinity for the target substance, based on similarity between nucleotide sequences and an evaluated value of the affinity of the nucleotide sequence, and a method for predicting a secondary structure of the nucleic acid molecule including the identified nucleotide sequence. The method of present invention includes the steps of extracting a single-stranded region by excluding based capable of forming a stem structure from the nucleotide sequence of the nucleic acid molecule; and searching a motif sequence from the single-stranded region, based on an evaluated value of the affinity.
Bibliography:Application Number: US201213477714