Identification of a Dynamic Metabolic Flux Model for a Mammalian Cell Culture ⁎⁎The authors would like to thank the Natural Science and Engineering Research Council (NSERC) and MilliporeSigma - A business of Merck KGaA

• Published in: IFAC-PapersOnLine Vol. 52; no. 1; pp. 88 - 93
• Main Authors: Carvalho, Mariana, Nikdel, Ali, Riesberg, Jeremiah, Lyons, Delia, Budman, Hector
• Format: Journal Article
• Language: English
• Published: Elsevier Ltd 2019
• Subjects: CHO cells; dynamic metabolic flux model; mammalian cell culture; dynamic metabolic flux model; CHO cells; mammalian cell culture
• ISSN: 2405-8963
• DOI: 10.1016/j.ifacol.2019.06.042

A Dynamic Metabolic Flux Model (DMFM) is a constraint-based approach where a cell is assumed to act as an optimizing agent that allocates resources to maximize/minimize a suitable biological objective. In this modeling approach, a linear programming (LP) problem solves the flux vector, at each time interval, by optimizing an objective function subject to constraints. The ultimate purpose of this research was to identify a DMFM model with a minimal number of parameters to fit and predict experimental data for batch operation of a mammalian cell culture. Two main objectives were pursued in this work: (i) - to identify a biologically meaningful objective function that mammalian cells are trying to maximize/minimize by comparing different candidates and (ii) - to systematically find a minimal set of limiting constraints. The limiting constraints were found from the values of the Lagrange multipliers of an optimization problem where the data was described by set based bounds. The developed DMFM model for CHO cells was in good agreement with data. The selected objective function involves the simultaneous maximization of growth combined with minimization of apoptosis and the limiting constraints were found to be associated to six metabolites (alanine, glutamate, lactate, ammonia, glycine, and glutamine).