Transcriptome analysis provides insights into the molecular mechanism of GhSAMDC 1 involving in rapid vegetative growth and early flowering in tobacco

• Published in: Scientific reports Vol. 12; no. 1; pp. 1 - 11
• Main Authors: Xinqi Cheng, Fangqin Pang, Wengang Tian, Xinxin Tang, Lan Wu, Xiaoming Hu, Huaguo Zhu
• Format: Journal Article
• Language: English
• Published: Nature Portfolio 01.08.2022
• ISSN: 2045-2322
• DOI: 10.1038/s41598-022-18064-4

Abstract In previous study, ectopic expression of GhSAMDC 1 improved vegetative growth and early flowering in tobacco, which had been explained through changes of polyamine content, polyamines and flowering relate genes expression. To further disclose the transcript changes of ectopic expression of GhSAMDC 1 in tobacco, the leaves from wild type and two transgenic lines at seedling (30 days old), bolting (60 days old) and flowering (90 days old) stages were performed for transcriptome analysis. Compared to wild type, a total of 938 differentially expressed genes (DEGs) were found to be up- or down-regulated in the two transgenic plants. GO and KEGG analysis revealed that tobacco of wild-type and transgenic lines were controlled by a complex gene network, which regulated multiple metabolic pathways. Phytohormone detection indicate GhSAMDC 1 affect endogenous phytohormone content, ABA and JA content are remarkably increased in transgenic plants. Furthermore, transcript factor analysis indicated 18 transcript factor families, including stress response, development and flowering related transcript factor families, especially AP2-EREBP, WRKY, HSF and Tify are the most over-represented in those transcript factor families. In conclusion, transcriptome analysis provides insights into the molecular mechanism of GhSAMDC 1 involving rapid vegetative growth and early flowering in tobacco.