2DIs: A SBML Compliant Web Platform for the Design and Modeling of Immune System Interactions

We present 2DIs, a web platform that allows the easy design of extracellular models of the immune system function, including the possibility to describe the most important immune system entities and interactions and to produce a validated SBML file of the model. 2DIs permits immunologists to directl...

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Bibliographic Details
Published inIntelligent Computing Theories and Application pp. 145 - 154
Main Authors Pennisi, Marzio, Russo, Giulia, Sgroi, Giuseppe, Parasiliti, Giuseppe, Pappalardo, Francesco
Format Book Chapter
LanguageEnglish
Published Cham Springer International Publishing 2017
SeriesLecture Notes in Computer Science
Subjects
Immune system modeling
Systems biology markup language
Web applications
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Summary:We present 2DIs, a web platform that allows the easy design of extracellular models of the immune system function, including the possibility to describe the most important immune system entities and interactions and to produce a validated SBML file of the model. 2DIs permits immunologists to directly describe and share their knowledge with other colleagues and, more importantly, with modelers that can therefore obtain an SBML-compliant modelling template of the immunological process that can be used to develop the computational model. This could introduce a novel way of communicating among immunologists and modelers, reducing the risk of errors and misinterpretations.
ISBN:3319633112
9783319633114
ISSN:0302-9743
1611-3349
DOI:10.1007/978-3-319-63312-1_13