Hetero-oligomerization of TDP-43 carboxy-terminal fragments with cellular proteins contributes to proteotoxicity

• Published in: bioRxiv
• Main Authors: Kitamura, Akira, Fujimoto, Ai, Kawashima, Rei, Lyu, Yidan, Moriya, Kanami, Kurata, Ayumi, Takahashi, Kazuho, Brielmann, Renee, Bott, Laura C, Morimoto, Richard I, Kinjo, Masataka
• Format: Paper
• Language: English
• Published: Cold Spring Harbor Cold Spring Harbor Laboratory Press 23.05.2022
• Subjects: Amyloid; Amyotrophic lateral sclerosis; Condensates; Cytotoxicity; Fibrils; Frontotemporal dementia; N-Terminus; Neurodegeneration; Neurodegenerative diseases; Oligomerization; Oligomers; Pathogenicity; Proteins
• DOI: 10.1101/2022.05.22.493003

Carboxy terminal fragments (CTFs) of TDP-43 contain an intrinsically disordered region (IDR) and form cytoplasmic condensates containing amyloid fibrils. Such condensates are toxic and associated with pathogenicity in several neurodegenerative disorders, including amyotrophic lateral sclerosis and frontotemporal lobar degeneration. However, the molecular details of how the domain of TDP-43 CTFs leads to condensation and cytotoxicity remain elusive. Here, we show that truncated RNA/DNA-recognition motif (RRM) at the N-terminus of TDP-43 CTFs is assembled and leads to the structural transition of the IDR, whereas the IDR itself of TDP-43 CTFs is difficult to assemble even if they are proximate intermolecularly. Hetero-oligomers of TDP-43 CTFs that have recruited other proteins that are essential for proteostasis into low mobile condensates are more toxic than homo-oligomers inside highly mobile condensates, implicating loss-of-function of the endogenous proteins by such oligomers, not necessarily the condensates, is associated with cytotoxicity. Furthermore, such toxicity of TDP-43 CTFs was cell-nonautonomously affected in the nematodes. We speculate that the misfolding and oligomeric characteristics of the truncated RRM at the N-terminus of TDP-43 CTFs define their condensation properties and toxicity by implanting and transmitting structures with toxic properties of the truncated RRM into the IDR. Competing Interest Statement The authors have declared no competing interest.