Mapping the living mouse brain neural architecture: strain specific patterns of brain structural and functional connectivity

• Published in: bioRxiv
• Main Authors: Karatas, Meltem, Noblet, Vincent, Md Taufiq Nasseef, Bienert, Thomas, Reisert, Marco, Hennig, Juergen, Yalcin, Ipek, Kieffer, Brigitte Lina, Dominik Von Elverfeldt, Laura-Adela Harsan
• Format: Paper
• Language: English
• Published: Cold Spring Harbor Cold Spring Harbor Laboratory Press 08.08.2019
• Subjects: Anatomy; Animal models; Aversion; Brain architecture; Brain mapping; Corpus callosum; Cortex; Functional anatomy; Functional magnetic resonance imaging; Gene mapping; Inbreeding; Mental disorders; Mesencephalon; Morphometry; Neostriatum; Nervous system; Neural networks; Neuroimaging; Neurological diseases; NMR; Nuclear magnetic resonance; Phenotypes; Reinforcement; Structure-function relationships; Thalamus
• DOI: 10.1101/730366

Mapping the structural and functional brain connectivity fingerprints became an essential approach in neurology and experimental neuroscience because network properties can underlie behavioral phenotypes. In mouse models, revealing strain related patterns of brain wiring have a tremendous importance, since these animals are used to answer questions related to neurological or neuropsychiatric disorders. C57BL/6 and BALB/cJ inbred strains are primary genetic backgrounds for brain disease modelling and for testing therapeutic approaches. Nevertheless, extensive literature describes basal differences in the behavioral, neuroanatomical and neurochemical profiles of the two strains, which raises the question whether the observed effects are pathology specific or depend on the genetic background. Here we performed a systematic comparative exploration of brain structure and function of C57BL/6 and BALB/cJ mice via Magnetic Resonance Imaging (MRI). We combined voxel-based morphometry (VBM), diffusion MRI and high resolution fiber mapping (hrFM) and resting state functional MRI (rs-fMRI) and depicted brain-wide dissimilarities in the morphology and connectome features in the two strains. Particularly C57BL/6 animals show bigger and denser frontal cortical areas, cortico-striatal tracts and thalamic and midbrain pathways, and higher density of fibers in the genu and splenium of the corpus callosum. These features are fairly reflected in the functional connectograms that emphasize differences in hubness, frontal cortical and basal forbrain connectivity. We demonstrate strongly divergent reward-aversion circuitry patterns and some variations of the default mode network features. Inter-hemispherical functional connectivity showed flexibility and adjustment regarding the structural patterns in a strain specific manner. We further provide high-resolution tractograms illustrating also inter-individual variability across inter-hemispherical callosal pathways in the BALB/cJ strain.