Draft genome sequence of the psychrophilic bacterium Lacinutrix jangbogonensis PAMC 27137(T)

Lacinutrix jangbogonensis PAMC 27137(T) is a psychrophilic bacterial strain isolated from the marine sediment of the Ross Sea, Antarctica. Here we present an annotated draft genome sequence of the strain PAMC 27137(T) which showed the narrower range in the growth temperature than other type strains...

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Published inMarine genomics Vol. 23; pp. 31 - 32
Main Authors Lee, Yung Mi, Shin, Seung Chul, Baek, Kiwoon, Hwang, Chung Yeon, Hong, Soon Gyu, Chun, Jongsik, Lee, Hong Kum
Format Journal Article
LanguageEnglish
Published Netherlands 01.10.2015
Subjects
Bacteroidetes - genetics
DNA, Bacterial - genetics
Genome, Bacterial
Lacinutrix jangbogonensis
Antarctica
Genome sequence
Psychrophilic bacterium
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Summary:Lacinutrix jangbogonensis PAMC 27137(T) is a psychrophilic bacterial strain isolated from the marine sediment of the Ross Sea, Antarctica. Here we present an annotated draft genome sequence of the strain PAMC 27137(T) which showed the narrower range in the growth temperature than other type strains of the genus Lacinutrix. The draft genome of 4,017,559bp with a G+C content of 30.6% comprised 14 scaffolds of 46 contigs containing 3589 protein-coding genes and 46 RNA genes. The function of 2185 (60.1%) proteins was predicted and 1943 (53.4%) proteins were assigned to COG functional categories. Comparative analysis of the draft genome across other type strains may provide clues into the mechanism of growth in narrow temperature range.
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ISSN:1876-7478
DOI:10.1016/j.margen.2015.04.002