Scolopendrasin I: a novel antimicrobial peptide isolated from the centipede Scolopendra subspinipes mutilans

• Published in: International Journal of Industrial Entomology Vol. 31; no. 1; pp. 14 - 19
• Main Authors: Joonha Lee, Inwoo Kim, Miae Kim, Eunyoung Yun, Sunghee Nam, Miyoung Ahn, Youngbo Lee, Jaesam Hwang
• Format: Journal Article
• Language: Korean
• Published: 한국잠사학회 30.09.2015
• Subjects: antimicrobial peptide; Scolopendra subspinipes mutilans; Scolopendrasin1; SVM algorithm; α-Helical
• ISSN: 1598-3579

In a previous report, we identified several candidate antimicrobial peptides through de novo RNA sequencing of the centipede Scolopendra subspinipes mutilans . Here, we identify and characterize one of these peptides, Scolopendrasin I. We identified the centipede antimicrobial peptide Cecropin from the centipede transcriptome using an SVM algorithm, and subsequently analyzed the amino acid sequence for predicted secondary structure using a GOR algorithm. We identified an alpha helical region of Cecropin and named it Scolopendrasin I. We then assessed antimicrobial and hemolytic activity of Scolopendrasin I. Scolopendrasin I showed antimicrobial activity against various microbes, including antibiotic-resistant Gram-negative bacteria, in a radial diffusion assay. Scolopendrasin I had potent antibacterial activity against acne-associated microbes in a colony count assay and showed no hemolytic activity in a hemolysis assay. In addition, we confirmed that Scolopendrasin I bound to the surface of bacteria via a specific interaction with lipoteichoic acid and lipopolysaccharide, two components of bacterial cell membranes. In conclusion, the results presented here provide evidence that this is an efficient strategy for antimicrobial peptide candidate identification and that Scolopendrasin I has potential for successful antibiotic development.