dendextend: an R package for visualizing, adjusting and comparing trees of hierarchical clustering

dendextend is an R package for creating and comparing visually appealing tree diagrams. dendextend provides utility functions for manipulating dendrogram objects (their color, shape and content) as well as several advanced methods for comparing trees to one another (both statistically and visually)....

Full description

Saved in:
Bibliographic Details
Published inBioinformatics (Oxford, England) Vol. 31; no. 22; pp. 3718 - 3720
Main Author Galili, Tal
Format Journal Article
LanguageEnglish
Published England Oxford University Press 15.11.2015
Subjects
Applications Notes
Cluster Analysis
Phylogeny
Software
Online AccessGet full text

Cover

More Information
Summary:dendextend is an R package for creating and comparing visually appealing tree diagrams. dendextend provides utility functions for manipulating dendrogram objects (their color, shape and content) as well as several advanced methods for comparing trees to one another (both statistically and visually). As such, dendextend offers a flexible framework for enhancing R's rich ecosystem of packages for performing hierarchical clustering of items. The dendextend R package (including detailed introductory vignettes) is available under the GPL-2 Open Source license and is freely available to download from CRAN at: (http://cran.r-project.org/package=dendextend) Tal.Galili@math.tau.ac.il.
Bibliography:ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 23
Associate Editor: Jonathan Wren
ISSN:1367-4811
1367-4803
1367-4811
DOI:10.1093/bioinformatics/btv428