Clustering of all known and predicted open reading frames of Escherichia coli K12

At present, the non redundant contig sequences of E.coli which covers about 70% of the whole chromosome are constructed. We predicted ORF's (Open Reading Frames) from 2, 554, 518 bp contig sequences on the basis of Shine-Dalgarno (ribosome binding) sequence. All ORF's were classified accor...

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Published inGenome Informatics Vol. 6; pp. 94 - 95
Main Authors Itoh, Takeshi, Yano, Minoru, Kajihara, Miwako, Takemoto, Keiko, Mori, Hirotada
Format Journal Article
LanguageEnglish
Published Japanese Society for Bioinformatics 1995
日本バイオインフォマティクス学会
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ISSN0919-9454
2185-842X
DOI10.11234/gi1990.6.94

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Summary:At present, the non redundant contig sequences of E.coli which covers about 70% of the whole chromosome are constructed. We predicted ORF's (Open Reading Frames) from 2, 554, 518 bp contig sequences on the basis of Shine-Dalgarno (ribosome binding) sequence. All ORF's were classified according to the structural similarities. Through examining the homology of ORF's in each group in detail, some structural units were revealed.
ISSN:0919-9454
2185-842X
DOI:10.11234/gi1990.6.94