Genomewide miRNA profiling of oral lichenoid disorders and oral squamous cell carcinoma

Objective To dissect the aberrant microRNA profile of oral lichenoid disorders (OLD) by analyzing the larger set of OLD samples tested so far. Materials and methods MicroRNA expression profiles were assessed using TLDA card in 32 samples (16 OLD, 8 OSCC, and 8 control). The findings were validated u...

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Published inOral diseases Vol. 22; no. 8; pp. 754 - 760
Main Authors Setién-Olarra, A, Bediaga, NG, Acha-Sagredo, A, Marichalar-Mendia, X, de Pancorbo, MM, Aguirre-Urizar, JM
Format Journal Article
LanguageEnglish
Published Denmark Blackwell Publishing Ltd 01.11.2016
Wiley Subscription Services, Inc
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Summary:Objective To dissect the aberrant microRNA profile of oral lichenoid disorders (OLD) by analyzing the larger set of OLD samples tested so far. Materials and methods MicroRNA expression profiles were assessed using TLDA card in 32 samples (16 OLD, 8 OSCC, and 8 control). The findings were validated using RT‐qPCR in an independent cohort of 91 samples. Results We identified 20 differentially expressed microRNAs in OLD, of which several are functionally related to cell proliferation, response to organic substances, or immune processes. Further validation of the top‐ranked microRNAs revealed that they were all aberrantly expressed in OLD. Conclusion We have identified a new microRNA signature associated with OLD that may provide a meaningful basis for better understanding the physiopathology of the disease. In addition, we validated seven microRNAs whose expression was shown to be higher in OLD tissue in comparison with the control and OSCC tissues.
Bibliography:Figure S1. Box plots comparing the expression profile of the microRNAs that have been shown to be differentially expressed between OLD and OSCC lesions in the three groups of samples analyzed.Table S1. Raw demographic data of the patients included in the study.Table S2. Statistical outcome of the aberrant microRNAs in the OLD vs control and OSCC vs control comparisons.Table S3. MicroRNA expression data from the screening phase for the 14 microRNAs selected.Table S4. Validated gene targets of the 20 microRNAs deregulated in OLD.Table S5. Gene Ontology analysis of the 20 microRNAs found to be deregulated in OLD.
DNA Bank Service (SGIker)
istex:CD5D50FB0CB63EFA21E99838B3877AB182E27FC9
Carlos III Health Institute - No. FIS_PI13/01211
SGIker
ArticleID:ODI12536
ark:/67375/WNG-10FHTCX8-T
ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 23
ISSN:1354-523X
1601-0825
DOI:10.1111/odi.12536