Evidence for Independent Segregation of the VP6-and-NSP4-Encoding Genes in Human Group A Rotavirus G5P[6] Strains

VP6- and NSP4- encoding genes of human group A rotavirus strain LL3354 with rare genotypes (G5P[6]), detected from China Lulong, was characterized by reverse transcription-PCR followed by sequencing and phylogenetic analysis. LL3354 joins the major cluster of SGI rotaviruses in the VP6 phylogenetic...

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Published in2008 2nd International Conference on Bioinformatics and Biomedical Engineering Vol. 2; pp. 301 - 305
Main Authors Li, Dan-Di, Yu, Jie-Mei, Cui, Shu-Xian, zhang, Qing, Yuan, Xin-Hui, Zhang, Dong-Liang, Cao, Da-Jiang, Yang, Su-Hua, Li, Hui-Ying, Wang, Zhong-Shan, Duan, Zhao-Jun
Format Conference Proceeding Journal Article
LanguageEnglish
Published IEEE 2008
Subjects
Amino acids
Animals
Capacitive sensors
Diseases
Encoding
Group a rotavirus
Humans
Pathogens
Phylogeny
RNA
Strain control
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Summary:VP6- and NSP4- encoding genes of human group A rotavirus strain LL3354 with rare genotypes (G5P[6]), detected from China Lulong, was characterized by reverse transcription-PCR followed by sequencing and phylogenetic analysis. LL3354 joins the major cluster of SGI rotaviruses in the VP6 phylogenetic tree, However, It was identified as NSP4 genotype B. Our results provide evidence for independent segregation of the VP6- and NSP4-encoding genes in human group A rotaviruses.
Bibliography:ObjectType-Article-1
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ISBN:9781424417476
1424417473
ISSN:2151-7614
2151-7622
DOI:10.1109/ICBBE.2008.77