Early Detection of Epidemic GII-4 Norovirus Strains in UK and Malawi: Role of Surveillance of Sporadic Acute Gastroenteritis in Anticipating Global Epidemics

• Published in: PloS one Vol. 11; no. 4; p. e0146972
• Main Authors: Allen, David J, Trainor, Eamonn, Callaghan, Anna, O'Brien, Sarah J, Cunliffe, Nigel A, Iturriza-Gómara, Miren
• Format: Journal Article
• Language: English
• Published: United States Public Library of Science 26.04.2016; Public Library of Science (PLoS)
• Subjects: Antigenic variants; Antigens; Biology and life sciences; Caliciviridae Infections - epidemiology; Caliciviridae Infections - virology; Capsid Proteins - genetics; Causes of; Child, Preschool; Cladistic analysis; Communities; Control; Diagnosis; Engineering and Technology; Epidemics; Epidemiological Monitoring; Epidemiology; Gastroenteritis; Gastroenteritis - epidemiology; Gastroenteritis - virology; Genetic Variation; Genomes; Genotype; Genotype & phenotype; Genotypes; Health aspects; Health surveillance; Human populations; Humans; Immunology; Infant; Infections; Infectious diseases; Malawi; Malawi - epidemiology; Medicine and Health Sciences; Molecular Epidemiology; Norovirus; Norovirus - classification; Norovirus - genetics; Outbreaks; Pandemics; People and Places; Phylogeny; Population; Prevention; Public health; Retrospective Studies; Risk factors; Sequence Alignment; Strains (organisms); Studies; Surveillance; United Kingdom; United Kingdom - epidemiology; Vaccines; Virology; Viruses; Malawi; United Kingdom; United Kingdom > UK; England
• ISSN: 1932-6203; 1932-6203
• DOI: 10.1371/journal.pone.0146972

Noroviruses are endemic in the human population, and are recognised as a leading cause of acute gastroenteritis worldwide. Although they are a highly diverse group of viruses, genogroup-II genotype-4 (GII-4) noroviruses are the most frequently identified strains worldwide. The predominance of GII-4 norovirus strains is driven by the periodic emergence of antigenic variants capable of evading herd protection. The global molecular epidemiology of emerging GII-4 strains is largely based on data from outbreak surveillance programmes, but the epidemiology of GII-4 strains among sporadic or community cases is far less well studied. To understand the distribution of GII-4 norovirus strains associated with gastroenteritis in the wider population, we characterised the GII-4 norovirus strains detected during studies of sporadic cases of infectious gastroenteritis collected in the UK and Malawi between 1993 and 2009. Our data shows that GII-4 norovirus strains that have emerged as strains of global epidemic importance have circulated in the community up to 18 years before their recognition as pandemic strains associated with increases in outbreaks. These data may suggest that more comprehensive surveillance programmes that incorporate strains associated with sporadic cases may provide a way for early detection of emerging strains with pandemic potential. This may be of particular relevance as vaccines become available.