Identification of tissue microRNAs predictive of sunitinib activity in patients with metastatic renal cell carcinoma

To identify tissue microRNAs predictive of sunitinib activity in patients with metastatic renal-cell-carcinoma (MRCC) and to evaluate in vitro their mechanism of action in sunitinib resistance. We screened 673 microRNAs using TaqMan Low-density-Arrays (TLDAs) in tumors from MRCC patients with extrem...

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Published inPloS one Vol. 9; no. 1; p. e86263
Main Authors Prior, Celia, Perez-Gracia, Jose Luis, Garcia-Donas, Jesus, Rodriguez-Antona, Cristina, Guruceaga, Elizabeth, Esteban, Emilio, Suarez, Cristina, Castellano, Daniel, del Alba, Aránzazu González, Lozano, Maria Dolores, Carles, Joan, Climent, Miguel Angel, Arranz, Jose Angel, Gallardo, Enrique, Puente, Javier, Bellmunt, Joaquim, Gurpide, Alfonso, Lopez-Picazo, Jose Maria, Hernandez, Alvaro Gonzalez, Mellado, Begoña, Martínez, Esther, Moreno, Fernando, Font, Albert, Calvo, Alfonso
Format Journal Article
LanguageEnglish
Published United States Public Library of Science 24.01.2014
Public Library of Science (PLoS)
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Summary:To identify tissue microRNAs predictive of sunitinib activity in patients with metastatic renal-cell-carcinoma (MRCC) and to evaluate in vitro their mechanism of action in sunitinib resistance. We screened 673 microRNAs using TaqMan Low-density-Arrays (TLDAs) in tumors from MRCC patients with extreme phenotypes of marked efficacy and resistance to sunitinib, selected from an identification cohort (n = 41). The most relevant differentially expressed microRNAs were selected using bioinformatics-based target prediction analysis and quantified by qRT-PCR in tumors from patients presenting similar phenotypes selected from an independent cohort (n = 101). In vitro experiments were conducted to study the role of miR-942 in sunitinib resistance. TLDAs identified 64 microRNAs differentially expressed in the identification cohort. Seven candidates were quantified by qRT-PCR in the independent series. MiR-942 was the most accurate predictor of sunitinib efficacy (p = 0.0074). High expression of miR-942, miR-628-5p, miR-133a, and miR-484 was significantly associated with decreased time to progression and overall survival. These microRNAs were also overexpressed in the sunitinib resistant cell line Caki-2 in comparison with the sensitive cell line. MiR-942 overexpression in Caki-2 up-regulates MMP-9 and VEGF secretion which, in turn, promote HBMEC endothelial migration and sunitinib resistance. We identified differentially expressed microRNAs in MRCC patients presenting marked sensitivity or resistance to sunitinib. MiR-942 was the best predictor of efficacy. We describe a novel paracrine mechanism through which high miR-942 levels in MRCC cells up-regulates MMP-9 and VEGF secretion to enhance endothelial migration and sunitinib resistance. Our results support further validation of these miRNA in clinical confirmatory studies.
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Conceived and designed the experiments: CP JLPG AC JGD E. Guruceaga. Performed the experiments: CP JLPG JGD CRA E. Guruceaga MDL AG AC. Analyzed the data: CP JLPG JGD CRA E. Guruceaga EE CS DC AGA MDL JC MAC JAA E. Gallardo JP JB AG JMLP AGH BM EM FM AF AC. Contributed reagents/materials/analysis tools: CP JLPG JGD CRA E. Guruceaga EE CS DC AGA MDL JC MAC JAA E. Gallardo JP JB AG JMLP AGH BM EM FM AF AC. Wrote the paper: CP JLPG JGD CRA E. Guruceaga EE CS DC AGA MDL JC MAC JAA E. Gallardo JP JB AG JMLP AGH BM EM FM AF AC. Manuscript drafting and revision: CP JLPG JGD CRA E. Guruceaga EE CS DC AGA MDL JC MAC JAA E. Gallardo JP JB AG JMLP AGH BM EM FM AF AC.
Competing Interests: Jose Luis Perez-Gracia is Associate Editor of PLOS ONE. This does not alter the authors' adherence to all the PLOS ONE policies on sharing data and materials.
ISSN:1932-6203
1932-6203
DOI:10.1371/journal.pone.0086263