Meta-analysis of genome-wide association data identifies four new susceptibility loci for colorectal cancer
Richard Houlston and colleagues identify four new susceptibility loci for colorectal cancer through a meta-analysis of genome-wide association data, followed by replication testing in a large collection of independent samples. The study brings to ten the number of confirmed loci harboring low-penetr...
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Published in | Nature genetics Vol. 40; no. 12; pp. 1426 - 1435 |
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Main Authors | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
Format | Journal Article |
Language | English |
Published |
New York
Nature Publishing Group US
01.12.2008
Nature Publishing Group |
Subjects | |
Online Access | Get full text |
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Summary: | Richard Houlston and colleagues identify four new susceptibility loci for colorectal cancer through a meta-analysis of genome-wide association data, followed by replication testing in a large collection of independent samples. The study brings to ten the number of confirmed loci harboring low-penetrance risk alleles for this common malignancy.
Genome-wide association (GWA) studies have identified multiple loci at which common variants modestly influence the risk of developing colorectal cancer (CRC). To enhance power to identify additional loci with similar effect sizes, we conducted a meta-analysis of two GWA studies, comprising 13,315 individuals genotyped for 38,710 common tagging SNPs. We undertook replication testing in up to eight independent case-control series comprising 27,418 subjects. We identified four previously unreported CRC risk loci at 14q22.2 (rs4444235,
BMP4
;
P
= 8.1 × 10
−10
), 16q22.1 (rs9929218,
CDH1
;
P
= 1.2 × 10
−8
), 19q13.1 (rs10411210,
RHPN2
;
P
= 4.6 × 10
−9
) and 20p12.3 (rs961253;
P
= 2.0 × 10
−10
). These findings underscore the value of large sample series for discovery and follow-up of genetic variants contributing to the etiology of CRC. |
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Bibliography: | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 A full list of authors and affiliations is provided at the end of this paper. |
ISSN: | 1061-4036 1546-1718 |
DOI: | 10.1038/ng.262 |