Structural lability of Barley stripe mosaic virus virions

• Published in: PloS one Vol. 8; no. 4; p. e60942
• Main Authors: Makarov, Valentin V, Skurat, Eugeny V, Semenyuk, Pavel I, Abashkin, Dmitry A, Kalinina, Natalya O, Arutyunyan, Alexsandr M, Solovyev, Andrey G, Dobrov, Eugeny N
• Format: Journal Article
• Language: English
• Published: United States Public Library of Science 17.04.2013; Public Library of Science (PLoS)
• Subjects: Analysis; Barley; Bioengineering; Bioinformatics; Biology; Calorimetry; Calorimetry, Differential Scanning; Capsid protein; Capsid Proteins - chemistry; Circular Dichroism; Dichroism; Differential scanning calorimetry; Fluorescence; Genomes; Hordeum - virology; Lability; Light; Light scattering; Microscopy; Models, Molecular; Mosaic Viruses - chemistry; Mosaic Viruses - isolation & purification; Optics and Photonics; Particle Size; Plant viruses; Potexvirus - chemistry; Protein Multimerization; Proteins; Scattering, Radiation; Spectra; Spectrometry, Fluorescence; Spectrophotometry, Ultraviolet; Structural Homology, Protein; Studies; Symmetry; Terminal protein; Tobacco; Tobacco Mosaic Virus; Viral infections; Viral proteins; Virion - chemistry; Virions; Virology; Viruses; Russia
• ISSN: 1932-6203; 1932-6203
• DOI: 10.1371/journal.pone.0060942

Virions of Barley stripe mosaic virus (BSMV) were neglected for more than thirty years after their basic properties were determined. In this paper, the physicochemical characteristics of BSMV virions and virion-derived viral capsid protein (CP) were analyzed, namely, the absorption and intrinsic fluorescence spectra, circular dichroism spectra, differential scanning calorimetry curves, and size distributions by dynamic laser light scattering. The structural properties of BSMV virions proved to be intermediate between those of Tobacco mosaic virus (TMV), a well-characterized virus with rigid rod-shaped virions, and flexuous filamentous plant viruses. The BSMV virions were found to be considerably more labile than expected from their rod-like morphology and a distant sequence relation of the BSMV and TMV CPs. The circular dichroism spectra of BSMV CP subunits incorporated into the virions, but not subunits of free CP, demonstrated a significant proportion of beta-structure elements, which were proposed to be localized mostly in the protein regions exposed on the virion outer surface. These beta-structure elements likely formed during virion assembly can comprise the N- and C-terminal protein regions unstructured in the non-virion CP and can mediate inter-subunit interactions. Based on computer-assisted structure modeling, a model for BSMV CP subunit structural fold compliant with the available experimental data was proposed.