Predicting outcome of Morris water maze test in vascular dementia mouse model with deep learning

• Published in: PloS one Vol. 13; no. 2; p. e0191708
• Main Authors: Higaki, Akinori, Mogi, Masaki, Iwanami, Jun, Min, Li-Juan, Bai, Hui-Yu, Shan, Bao-Shuai, Kukida, Masayoshi, Kan-No, Harumi, Ikeda, Shuntaro, Higaki, Jitsuo, Horiuchi, Masatsugu
• Format: Journal Article
• Language: English
• Published: United States Public Library of Science 07.02.2018; Public Library of Science (PLoS)
• Subjects: Analysis; Animals; Artificial neural networks; Behavior therapy; Biology and Life Sciences; Care and treatment; Computer and Information Sciences; Dementia, Vascular - physiopathology; Diagnosis; Disease Models, Animal; Maze Learning; Medicine and Health Sciences; Mice; Physical Sciences; Prognosis; Research and Analysis Methods; Social Sciences; Vascular dementia
• ISSN: 1932-6203; 1932-6203
• DOI: 10.1371/journal.pone.0191708

The Morris water maze test (MWM) is one of the most popular and established behavioral tests to evaluate rodents' spatial learning ability. The conventional training period is around 5 days, but there is no clear evidence or guidelines about the appropriate duration. In many cases, the final outcome of the MWM seems predicable from previous data and their trend. So, we assumed that if we can predict the final result with high accuracy, the experimental period could be shortened and the burden on testers reduced. An artificial neural network (ANN) is a useful modeling method for datasets that enables us to obtain an accurate mathematical model. Therefore, we constructed an ANN system to estimate the final outcome in MWM from the previously obtained 4 days of data in both normal mice and vascular dementia model mice. Ten-week-old male C57B1/6 mice (wild type, WT) were subjected to bilateral common carotid artery stenosis (WT-BCAS) or sham-operation (WT-sham). At 6 weeks after surgery, we evaluated their cognitive function with MWM. Mean escape latency was significantly longer in WT-BCAS than in WT-sham. All data were collected and used as training data and test data for the ANN system. We defined a multiple layer perceptron (MLP) as a prediction model using an open source framework for deep learning, Chainer. After a certain number of updates, we compared the predicted values and actual measured values with test data. A significant correlation coefficient was derived form the updated ANN model in both WT-sham and WT-BCAS. Next, we analyzed the predictive capability of human testers with the same datasets. There was no significant difference in the prediction accuracy between human testers and ANN models in both WT-sham and WT-BCAS. In conclusion, deep learning method with ANN could predict the final outcome in MWM from 4 days of data with high predictive accuracy in a vascular dementia model.