Application of loop-mediated isothermal amplification combined with colorimetric and lateral flow dipstick visualization as the potential point-of-care testing for Corynebacterium diphtheriae

• Published in: BMC infectious diseases Vol. 20; no. 1; pp. 308 - 9
• Main Authors: Zasada, Aleksandra A, Wiatrzyk, Aldona, Czajka, Urszula, Brodzik, Klaudia, Formińska, Kamila, Mosiej, Ewa, Prygiel, Marta, Krysztopa-Grzybowska, Katarzyna, Wdowiak, Karol
• Format: Journal Article
• Language: English
• Published: England BioMed Central Ltd 25.04.2020; BioMed Central; BMC
• Subjects: Assaying; Bacteria; Bacterial proteins; Bacterial Proteins - genetics; Calcein; Collection; Colorimetric detection; Colorimetry; Colorimetry - instrumentation; Colorimetry - methods; Corynebacterium; Corynebacterium diphtheriae; Corynebacterium diphtheriae - genetics; Corynebacterium diphtheriae - isolation & purification; Deoxyribonucleic acid; Diagnosis; Diphtheria; Diphtheria - microbiology; DNA; DNA-Binding Proteins - genetics; Gene amplification; Gram-negative bacteria; Gram-Negative Bacteria - genetics; Gram-Positive Bacteria - genetics; Health aspects; Humans; Hygiene; Infections; Infectious diseases; LAMP; Lateral flow dipstick; Limit of Detection; Medical laboratories; Nucleic Acid Amplification Techniques - methods; Phenols; POCT; Point-of-Care Testing; Public health; Sensitivity; Streptococcus infections; Toxins; Visualization; Poland; United States > US; Germany; Indonesia; LAMP; Corynebacterium diphtheriae; Diphtheria; POCT; Lateral flow dipstick; Colorimetric detection
• ISSN: 1471-2334; 1471-2334
• DOI: 10.1186/s12879-020-05037-z

Diphtheria outbreaks occurred in endemic areas and imported and indigenous cases are reported in UE/EEA. Because of the high infectiveness and severity of the disease, early and accurate diagnosis of each suspected case is essential for the treatment and management of the case and close contacts. The aim of the study was to establish simple and rapid testing methods based on Loop-Mediated Isothermal Amplification (LAMP) assay for the detection of Corynebacterium diphtheriae and differentiation between toxigenic and non-toxigenic strains. Corynebacterium diphtheriae and Corynebacterium ulcerans isolates from the National Institute of Public Health-National Institute of Hygiene collection were used for the development of LAMP assay for the diagnosis of diphtheria and nontoxigenic C. diphtheriae infections. Various colorimetric methods for visualization of results were investigated. Sensitivity and specificity of the assay were examined using a collection of DNA samples from various gram-positive and gram-negative bacteria. The LAMP assay for tox and dtxR genes was developed. The sensitivity and specificity of the assay were calculated as 100%. The detection limit was estimated as 1.42 pg/μl concentration of DNA template when the reaction was conducted for 60 min. However, the detection limit was lowered 10 times for every 10 min of reduction in the time of incubation during the reaction. Positive results were successfully detected colorimetrically using hydroxynaphthol blue, calcein, QuantiFluor, and lateral flow Milenia HybriDetect dipsticks. The assay developed in the study might be applied for point-of-care testing of diphtheria and other C. diphtheriae infections as well as for other infections caused by diphtheria-toxin producing Corynebacterium species. It is highly sensitive, specific, inexpensive, easy to use, and suitable for low-resource settings.