Understanding the hidden relations between pro- and anti-inflammatory cytokine genes in bovine oviduct epithelium using a multilayer response surface method
An understanding gene-gene interaction helps users to design the next experiments efficiently and (if applicable) to make a better decision of drugs application based on the different biological conditions of the patients. This study aimed to identify changes in the hidden relationships between pro-...
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Published in | Scientific reports Vol. 9; no. 1; p. 3189 |
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Main Authors | , , |
Format | Journal Article |
Language | English |
Published |
London
Nature Publishing Group UK
28.02.2019
Nature Publishing Group |
Subjects | |
Online Access | Get full text |
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Summary: | An understanding gene-gene interaction helps users to design the next experiments efficiently and (if applicable) to make a better decision of drugs application based on the different biological conditions of the patients. This study aimed to identify changes in the hidden relationships between pro- and anti-inflammatory cytokine genes in the bovine oviduct epithelial cells (BOECs) under various experimental conditions using a multilayer response surface method. It was noted that under physiological conditions (BOECs with sperm or sex hormones, such as ovarian sex steroids and LH), the mRNA expressions of
IL
1
0
,
IL1B
,
TNFA
,
TLR4
, and
TNFA
were associated with
IL1B
,
TNFA
,
TLR4
,
IL4
, and
IL10
, respectively. Under pathophysiological + physiological conditions (BOECs with lipopolysaccharide + hormones, alpha-1-acid glycoprotein + hormones, zearalenone + hormones, or urea + hormones), the relationship among genes was changed. For example, the expression of
IL10
and
TNFA
was associated with (
IL1B
,
TNFA
, or
IL4
) and
TLR4
expression, respectively. Furthermore, under physiological conditions, the co-expression of
IL10
+
TNFA
,
TLR4
+
IL4
,
TNFA
+
IL4
,
TNFA
+
IL4
, or
IL10
+
IL1B
and under pathophysiological + physiological conditions, the co-expression of
IL10
+
IL4
,
IL4
+
IL10
,
TNFA
+
IL10
,
TNFA
+
TLR4
, or
IL10
+
IL1B
were associated with
IL1B
,
TNFA
,
TLR4
,
IL10
, or
IL4
expression, respectively. Collectively, the relationships between pro- and anti-inflammatory cytokine genes can be changed with respect to the presence/absence of toxins, sex hormones, sperm, and co-expression of other gene pairs in BOECs, suggesting that considerable cautions are needed in interpreting the results obtained from such narrowly focused
in vitro
studies. |
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Bibliography: | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 |
ISSN: | 2045-2322 2045-2322 |
DOI: | 10.1038/s41598-019-39081-w |