Soil parameters, land use, and geographical distance drive soil bacterial communities along a European transect

• Published in: Scientific reports Vol. 9; no. 1; p. 605
• Main Authors: Plassart, Pierre, Prévost-Bouré, Nicolas Chemidlin, Uroz, Stéphane, Dequiedt, Samuel, Stone, Dorothy, Creamer, Rachel, Griffiths, Robert I., Bailey, Mark J., Ranjard, Lionel, Lemanceau, Philippe
• Format: Journal Article
• Language: English
• Published: London Nature Publishing Group UK 24.01.2019; Nature Publishing Group
• Subjects: 704/158; 704/158/852; Agricultural sciences; Bacteria; Bodembiologie; Bodembiologie en biologische bodemkwaliteit; Chair Soil Biology and Biological Soil Quality; Climatic conditions; Environmental factors; Grasslands; Humanities and Social Sciences; Land use; Leerstoelgroep Bodembiologie en biologische Bodemkwaliteit; Life Sciences; multidisciplinary; Organic matter; Organic soils; PE&RC; pH effects; Physicochemical properties; rRNA 16S; Science; Science (multidisciplinary); Soil Biology; Soil Biology and Biological Soil Quality; Soil management; Soil microorganisms; Soil properties; Soil study; Spatial variations; Sustainability management; Soil bacterial; Soil parameter; Land use
• ISSN: 2045-2322; 2045-2322
• DOI: 10.1038/s41598-018-36867-2

To better understand the relationship between soil bacterial communities, soil physicochemical properties, land use and geographical distance, we considered for the first time ever a European transect running from Sweden down to Portugal and from France to Slovenia. We investigated 71 sites based on their range of variation in soil properties (pH, texture and organic matter), climatic conditions (Atlantic, alpine, boreal, continental, Mediterranean) and land uses (arable, forest and grassland). 16S rRNA gene amplicon pyrosequencing revealed that bacterial communities highly varied in diversity, richness, and structure according to environmental factors. At the European scale, taxa area relationship (TAR) was significant, supporting spatial structuration of bacterial communities. Spatial variations in community diversity and structure were mainly driven by soil physicochemical parameters. Within soil clusters (k-means approach) corresponding to similar edaphic and climatic properties, but to multiple land uses, land use was a major driver of the bacterial communities. Our analyses identified specific indicators of land use (arable, forest, grasslands) or soil conditions (pH, organic C, texture). These findings provide unprecedented information on soil bacterial communities at the European scale and on the drivers involved; possible applications for sustainable soil management are discussed.