Revealing pseudorotation and ring-opening reactions in colloidal organic molecules

• Published in: Nature communications Vol. 12; no. 1; p. 2810
• Main Authors: Swinkels, P. J. M., Stuij, S. G., Gong, Z., Jonas, H., Ruffino, N., Linden, B. van der, Bolhuis, P. G., Sacanna, S., Woutersen, S., Schall, P.
• Format: Journal Article
• Language: English
• Published: London Nature Publishing Group UK 14.05.2021; Nature Publishing Group; Nature Portfolio
• Subjects: 639/301/923/916; 639/638/440/94; 639/766/94; Alkanes; Atoms & subatomic particles; Chemical synthesis; Colloid chemistry; Colloids; Coordination numbers; Crystallization; Cyclopentane; Entropy; Glass transition; High temperature; Humanities and Social Sciences; Mimicry; multidisciplinary; Organic chemistry; Ring opening; Science; Science (multidisciplinary); Self-assembly
• ISSN: 2041-1723; 2041-1723
• DOI: 10.1038/s41467-021-23144-6

Colloids have a rich history of being used as ‘big atoms’ mimicking real atoms to study crystallization, gelation and the glass transition of condensed matter. Emulating the dynamics of molecules, however, has remained elusive. Recent advances in colloid chemistry allow patchy particles to be synthesized with accurate control over shape, functionality and coordination number. Here, we show that colloidal alkanes, specifically colloidal cyclopentane, assembled from tetrameric patchy particles by critical Casimir forces undergo the same chemical transformations as their atomic counterparts, allowing their dynamics to be studied in real time. We directly observe transitions between chair and twist conformations in colloidal cyclopentane, and we elucidate the interplay of bond bending strain and entropy in the molecular transition states and ring-opening reactions. These results open the door to investigate complex molecular kinetics and molecular reactions in the high-temperature classical limit, in which the colloidal analogue becomes a good model. Anisotropically functionalized colloids can serve as meso-atoms for self-assembly of new materials. Swinkels et al. extend the analogy with atomic scale counterparts and show how familiar ring opening and puckering emerges in alkane-like assemblies of tetraedric patchy particles.