Precision dynamical mapping using topological data analysis reveals a hub-like transition state at rest

In the absence of external stimuli, neural activity continuously evolves from one configuration to another. Whether these transitions or explorations follow some underlying arrangement or lack a predictable ordered plan remains to be determined. Here, using fMRI data from highly sampled individuals...

Full description

Saved in:
Bibliographic Details
Published inNature communications Vol. 13; no. 1; pp. 4791 - 19
Main Authors Saggar, Manish, Shine, James M., Liégeois, Raphaël, Dosenbach, Nico U. F., Fair, Damien
Format Journal Article
LanguageEnglish
Published London Nature Publishing Group UK 15.08.2022
Nature Publishing Group
Nature Portfolio
Subjects
59/36
631/114/2408
631/378/116/1925
Activity patterns
Brain
Brain - diagnostic imaging
Brain Mapping
Configurations
Data Analysis
External stimuli
Functional magnetic resonance imaging
Humanities and Social Sciences
Humans
Magnetic Resonance Imaging
multidisciplinary
Nerve Net - diagnostic imaging
Science
Science (multidisciplinary)
Topology
Online AccessGet full text

Cover

Abstract In the absence of external stimuli, neural activity continuously evolves from one configuration to another. Whether these transitions or explorations follow some underlying arrangement or lack a predictable ordered plan remains to be determined. Here, using fMRI data from highly sampled individuals (~5 hours of resting-state data per individual), we aimed to reveal the rules that govern transitions in brain activity at rest. Our Topological Data Analysis based Mapper approach characterized a highly visited transition state of the brain that acts as a switch between different neural configurations to organize the spontaneous brain activity. Further, while the transition state was characterized by a uniform representation of canonical resting-state networks (RSNs), the periphery of the landscape was dominated by a subject-specific combination of RSNs. Altogether, we revealed rules or principles that organize spontaneous brain activity using a precision dynamics approach. Although spontaneous brain activity is complex and clinically relevant, it is still unclear whether transitions in resting brain activity follow an underlying arrangement or whether they are unpredictable. In this work, the authors revealed a transition state of the brain that acts like a switch between states and forms the basis for the continuous evolution of brain activity patterns at rest.
AbstractList In the absence of external stimuli, neural activity continuously evolves from one configuration to another. Whether these transitions or explorations follow some underlying arrangement or lack a predictable ordered plan remains to be determined. Here, using fMRI data from highly sampled individuals (~5 hours of resting-state data per individual), we aimed to reveal the rules that govern transitions in brain activity at rest. Our Topological Data Analysis based Mapper approach characterized a highly visited transition state of the brain that acts as a switch between different neural configurations to organize the spontaneous brain activity. Further, while the transition state was characterized by a uniform representation of canonical resting-state networks (RSNs), the periphery of the landscape was dominated by a subject-specific combination of RSNs. Altogether, we revealed rules or principles that organize spontaneous brain activity using a precision dynamics approach.In the absence of external stimuli, neural activity continuously evolves from one configuration to another. Whether these transitions or explorations follow some underlying arrangement or lack a predictable ordered plan remains to be determined. Here, using fMRI data from highly sampled individuals (~5 hours of resting-state data per individual), we aimed to reveal the rules that govern transitions in brain activity at rest. Our Topological Data Analysis based Mapper approach characterized a highly visited transition state of the brain that acts as a switch between different neural configurations to organize the spontaneous brain activity. Further, while the transition state was characterized by a uniform representation of canonical resting-state networks (RSNs), the periphery of the landscape was dominated by a subject-specific combination of RSNs. Altogether, we revealed rules or principles that organize spontaneous brain activity using a precision dynamics approach.
In the absence of external stimuli, neural activity continuously evolves from one configuration to another. Whether these transitions or explorations follow some underlying arrangement or lack a predictable ordered plan remains to be determined. Here, using fMRI data from highly sampled individuals (~5 hours of resting-state data per individual), we aimed to reveal the rules that govern transitions in brain activity at rest. Our Topological Data Analysis based Mapper approach characterized a highly visited transition state of the brain that acts as a switch between different neural configurations to organize the spontaneous brain activity. Further, while the transition state was characterized by a uniform representation of canonical resting-state networks (RSNs), the periphery of the landscape was dominated by a subject-specific combination of RSNs. Altogether, we revealed rules or principles that organize spontaneous brain activity using a precision dynamics approach.
In the absence of external stimuli, neural activity continuously evolves from one configuration to another. Whether these transitions or explorations follow some underlying arrangement or lack a predictable ordered plan remains to be determined. Here, using fMRI data from highly sampled individuals (~5 hours of resting-state data per individual), we aimed to reveal the rules that govern transitions in brain activity at rest. Our Topological Data Analysis based Mapper approach characterized a highly visited transition state of the brain that acts as a switch between different neural configurations to organize the spontaneous brain activity. Further, while the transition state was characterized by a uniform representation of canonical resting-state networks (RSNs), the periphery of the landscape was dominated by a subject-specific combination of RSNs. Altogether, we revealed rules or principles that organize spontaneous brain activity using a precision dynamics approach.Although spontaneous brain activity is complex and clinically relevant, it is still unclear whether transitions in resting brain activity follow an underlying arrangement or whether they are unpredictable. In this work, the authors revealed a transition state of the brain that acts like a switch between states and forms the basis for the continuous evolution of brain activity patterns at rest.
In the absence of external stimuli, neural activity continuously evolves from one configuration to another. Whether these transitions or explorations follow some underlying arrangement or lack a predictable ordered plan remains to be determined. Here, using fMRI data from highly sampled individuals (~5 hours of resting-state data per individual), we aimed to reveal the rules that govern transitions in brain activity at rest. Our Topological Data Analysis based Mapper approach characterized a highly visited transition state of the brain that acts as a switch between different neural configurations to organize the spontaneous brain activity. Further, while the transition state was characterized by a uniform representation of canonical resting-state networks (RSNs), the periphery of the landscape was dominated by a subject-specific combination of RSNs. Altogether, we revealed rules or principles that organize spontaneous brain activity using a precision dynamics approach. Although spontaneous brain activity is complex and clinically relevant, it is still unclear whether transitions in resting brain activity follow an underlying arrangement or whether they are unpredictable. In this work, the authors revealed a transition state of the brain that acts like a switch between states and forms the basis for the continuous evolution of brain activity patterns at rest.
Although spontaneous brain activity is complex and clinically relevant, it is still unclear whether transitions in resting brain activity follow an underlying arrangement or whether they are unpredictable. In this work, the authors revealed a transition state of the brain that acts like a switch between states and forms the basis for the continuous evolution of brain activity patterns at rest.
ArticleNumber 4791
Author Fair, Damien
Shine, James M.
Saggar, Manish
Dosenbach, Nico U. F.
Liégeois, Raphaël
Author_xml – sequence: 1
  givenname: Manish
  orcidid: 0000-0002-5307-2249
  surname: Saggar
  fullname: Saggar, Manish
  email: saggar@stanford.edu
  organization: Department of Psychiatry and Behavioral Sciences, Stanford University
– sequence: 2
  givenname: James M.
  orcidid: 0000-0003-1762-5499
  surname: Shine
  fullname: Shine, James M.
  organization: Brain and Mind Center, The University of Sydney
– sequence: 3
  givenname: Raphaël
  surname: Liégeois
  fullname: Liégeois, Raphaël
  organization: Institute of Bioengineering, École Polytechnique Fédérale de Lausanne, Department of Radiology and Medical Informatics, Faculty of Medicine, University of Geneva
– sequence: 4
  givenname: Nico U. F.
  orcidid: 0000-0002-6876-7078
  surname: Dosenbach
  fullname: Dosenbach, Nico U. F.
  organization: Departments of Neurology, Radiology, Pediatrics and Biomedical Engineering, Washington University School of Medicine
– sequence: 5
  givenname: Damien
  orcidid: 0000-0001-8602-393X
  surname: Fair
  fullname: Fair, Damien
  organization: Department of Pediatrics, University of Minnesota Medical School
BackLink https://www.ncbi.nlm.nih.gov/pubmed/35970984$$D View this record in MEDLINE/PubMed
BookMark eNp9kktvFSEUx4mpsQ_7BVyYSdy4GeU1wGxMTKO1SRNd6JoAA1OuM3AFpsn99nLv1Np2URZAOL_z57xOwVGIwQLwBsEPCBLxMVNEGW8hxi3BRKAWvwAnGFLUIo7J0YP7MTjPeQPrIj0SlL4Cx6TrOewFPQHjj2SNzz6GZtgFNXujpmZW260PY7Pk_V7iNk5xPFgGVVSjgpp22ecm2Vurptyo5mbR7eR_26YkFbIve71cVLGNKhXL5TV46Spqz-_OM_Dr65efF9_a6--XVxefr1vDICst7aGyPRw0xcY4w4lF0LD6RIywHSGO16QHbA1mHOKOdVbjjhLuHKKW856cgatVd4hqI7fJzyrtZFReHh5iGqVKxZvJys444TTTAxeQOs01Yq7D2mijBoaJq1qfVq3tomc7GBtqdtMj0ceW4G_kGG9lT7hgDFaB93cCKf5ZahXk7LOx06SCjUuWuObQ866DuKLvnqCbuKRa6JUinRAQVertw4juQ_nXzwrgFTAp5pysu0cQlPu5kevcyDo38jA3cv-3eOJkfO1d7WHNyk_Pu5LVNdd_wmjT_7Cf8foLYyDYhw
CitedBy_id crossref_primary_10_1523_ENEURO_0146_23_2023
crossref_primary_10_7717_peerj_15721
crossref_primary_10_1038_s41598_024_69426_z
crossref_primary_10_1016_j_neuroimage_2022_119686
crossref_primary_10_1002_hbm_26663
crossref_primary_10_1162_netn_a_00301
crossref_primary_10_1007_s12021_023_09645_3
crossref_primary_10_1162_netn_a_00403
crossref_primary_10_1162_netn_a_00425
crossref_primary_10_3389_fncir_2025_1500227
crossref_primary_10_1038_s41598_024_55726_x
crossref_primary_10_1016_j_neuri_2023_100148
crossref_primary_10_7554_eLife_85487
crossref_primary_10_1038_s41567_022_01852_0
crossref_primary_10_1093_cercor_bhad228
crossref_primary_10_1162_imag_a_00413
crossref_primary_10_1002_hbm_26304
crossref_primary_10_1007_s11357_024_01366_y
Cites_doi 10.1038/s41467-019-10317-7
10.1016/j.neuroimage.2004.07.051
10.1016/j.neuroimage.2016.12.061
10.1073/pnas.1400181111
10.1016/j.neuroimage.2013.05.041
10.1126/science.290.5500.2323
10.1093/cercor/bhu239
10.1016/j.neuron.2012.01.010
10.1073/pnas.2005531117
10.1016/j.celrep.2020.108540
10.1371/journal.pone.0140134
10.1016/j.media.2007.06.004
10.1016/j.neuroimage.2019.03.019
10.7554/eLife.01867
10.1002/mrm.1910350312
10.3389/fnhum.2014.00897
10.1093/brain/aww232
10.1007/s004220050572
10.1073/pnas.1418031112
10.1007/s11065-015-9294-9
10.1038/s41592-020-00984-6
10.1016/j.neuron.2015.06.037
10.1038/s41467-020-18717-w
10.1038/s41467-018-03462-y
10.1152/jn.00338.2011
10.1523/JNEUROSCI.0754-09.2009
10.1016/j.dcn.2018.03.001
10.7554/eLife.17267
10.1016/j.neuroimage.2015.07.064
10.3389/fnhum.2012.00339
10.1016/j.biopsych.2020.02.016
10.1073/pnas.1705120114
10.1038/s41586-021-03497-0
10.1016/j.neuroimage.2017.10.022
10.1016/j.tics.2008.01.001
10.1016/j.neuron.2017.07.011
10.1016/j.neuroimage.2007.04.042
10.1038/s41467-018-03664-4
10.1016/j.tics.2016.03.001
10.1162/netn_a_00116
10.1016/j.neuroimage.2017.09.012
10.1073/pnas.1525369113
10.1073/pnas.1608282113
10.1016/j.neuroimage.2019.03.020
10.1371/journal.pone.0015710
10.1523/ENEURO.0384-19.2019
10.1038/s41593-018-0312-0
10.3174/ajnr.A2330
10.1371/journal.pone.0001049
10.1016/j.conb.2009.07.005
10.1016/j.neuroimage.2013.08.048
10.1103/PhysRevLett.73.951
10.1016/j.neuroimage.2013.04.127
10.1038/nn.4497
10.1016/j.nicl.2014.07.003
10.1006/nimg.2002.1132
10.1090/S0273-0979-09-01249-X
10.1126/science.aav7893
10.1016/j.neuroimage.2013.05.039
10.3389/fncom.2016.00060
10.1038/nn1792
10.1038/s41593-020-00719-y
10.1016/j.neuroimage.2012.03.017
10.1016/j.neuroimage.2010.08.030
10.1016/j.neuroimage.2009.06.060
10.1016/j.tics.2013.09.012
10.2312/SPBG/SPBG07/091-100
10.1016/j.neuron.2016.09.018
10.1371/journal.pcbi.1002634
10.1093/gigascience/giw011
10.1002/hbm.21513
10.1038/nn.4361
10.1016/j.neuroimage.2014.06.052
10.1109/TPAMI.2013.50
10.1038/nn.4238
10.1038/s41467-019-08999-0
10.1016/j.neuroimage.2011.12.028
10.1109/TMI.2010.2046908
10.1016/j.neuroimage.2014.11.001
10.1126/science.1195870
10.1073/pnas.1216856110
10.1038/srep01236
10.1016/j.neuron.2009.03.014
10.1093/cercor/bhw265
10.3389/fnsys.2013.00101
10.1162/netn_a_00093
10.1016/j.neuroimage.2019.116400
10.1152/jn.1995.73.5.2072
10.1109/42.906424
10.1016/j.neuron.2008.08.026
10.1002/hbm.23215
10.1002/1522-2594(200012)44:6<925::AID-MRM14>3.0.CO;2-M
10.1089/brain.2014.0250
10.1016/j.neuroimage.2020.117385
10.1016/j.neuron.2014.10.015
10.1371/journal.pcbi.1000381
10.1016/j.tins.2010.01.006
10.1038/s41592-018-0235-4
10.1073/pnas.0704320104
10.1016/j.neuroimage.2011.10.018
10.1038/nature18933
10.1016/j.tics.2013.09.016
10.1073/pnas.0811879106
10.1101/074856
10.1017/nws.2013.8
10.1101/2021.03.12.435168
10.1016/C2012-0-06036-X
10.1126/science.295.5552.7a
10.1017/cbo9780511810633.003
10.1016/j.neuroimage.2012.02.018
10.1101/2021.03.15.435361
ContentType Journal Article
Copyright The Author(s) 2022
2022. The Author(s).
The Author(s) 2022. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.
Copyright_xml – notice: The Author(s) 2022
– notice: 2022. The Author(s).
– notice: The Author(s) 2022. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.
DBID C6C
AAYXX
CITATION
CGR
CUY
CVF
ECM
EIF
NPM
3V.
7QL
7QP
7QR
7SN
7SS
7ST
7T5
7T7
7TM
7TO
7X7
7XB
88E
8AO
8FD
8FE
8FG
8FH
8FI
8FJ
8FK
ABUWG
AEUYN
AFKRA
ARAPS
AZQEC
BBNVY
BENPR
BGLVJ
BHPHI
C1K
CCPQU
DWQXO
FR3
FYUFA
GHDGH
GNUQQ
H94
HCIFZ
K9.
LK8
M0S
M1P
M7P
P5Z
P62
P64
PHGZM
PHGZT
PIMPY
PJZUB
PKEHL
PPXIY
PQEST
PQGLB
PQQKQ
PQUKI
PRINS
RC3
SOI
7X8
5PM
DOA
DOI 10.1038/s41467-022-32381-2
DatabaseName Springer Nature OA Free Journals
CrossRef
Medline
MEDLINE
MEDLINE (Ovid)
MEDLINE
MEDLINE
PubMed
ProQuest Central (Corporate)
Bacteriology Abstracts (Microbiology B)
Calcium & Calcified Tissue Abstracts
Chemoreception Abstracts
Ecology Abstracts
Entomology Abstracts (Full archive)
Environment Abstracts
Immunology Abstracts
Industrial and Applied Microbiology Abstracts (Microbiology A)
Nucleic Acids Abstracts
Oncogenes and Growth Factors Abstracts
Health & Medical Collection
ProQuest Central (purchase pre-March 2016)
Medical Database (Alumni Edition)
ProQuest Pharma Collection
Technology Research Database
ProQuest SciTech Collection
ProQuest Technology Collection
ProQuest Natural Science Journals
Hospital Premium Collection
Hospital Premium Collection (Alumni Edition)
ProQuest Central (Alumni) (purchase pre-March 2016)
ProQuest Central (Alumni)
ProQuest One Sustainability
ProQuest Central UK/Ireland
Advanced Technologies & Aerospace Collection
ProQuest Central Essentials
Biological Science Collection
ProQuest Central
Technology Collection
Natural Science Collection
Environmental Sciences and Pollution Management
ProQuest One Community College
ProQuest Central Korea
Engineering Research Database
Health Research Premium Collection
Health Research Premium Collection (Alumni)
ProQuest Central Student
AIDS and Cancer Research Abstracts
ProQuest SciTech Premium Collection
ProQuest Health & Medical Complete (Alumni)
Biological Sciences
ProQuest Health & Medical Collection
Proquest Medical Database
Biological Science Database
Advanced Technologies & Aerospace Database
ProQuest Advanced Technologies & Aerospace Collection
Biotechnology and BioEngineering Abstracts
ProQuest Central Premium
ProQuest One Academic
Publicly Available Content Database (Proquest)
ProQuest Health & Medical Research Collection
ProQuest One Academic Middle East (New)
ProQuest One Health & Nursing
ProQuest One Academic Eastern Edition (DO NOT USE)
ProQuest One Applied & Life Sciences
ProQuest One Academic
ProQuest One Academic UKI Edition
ProQuest Central China
Genetics Abstracts
Environment Abstracts
MEDLINE - Academic
PubMed Central (Full Participant titles)
DOAJ Directory of Open Access Journals
DatabaseTitle CrossRef
MEDLINE
Medline Complete
MEDLINE with Full Text
PubMed
MEDLINE (Ovid)
Publicly Available Content Database
ProQuest Central Student
Oncogenes and Growth Factors Abstracts
ProQuest Advanced Technologies & Aerospace Collection
ProQuest Central Essentials
Nucleic Acids Abstracts
SciTech Premium Collection
ProQuest Central China
Environmental Sciences and Pollution Management
ProQuest One Applied & Life Sciences
ProQuest One Sustainability
Health Research Premium Collection
Natural Science Collection
Health & Medical Research Collection
Biological Science Collection
Chemoreception Abstracts
Industrial and Applied Microbiology Abstracts (Microbiology A)
ProQuest Central (New)
ProQuest Medical Library (Alumni)
Advanced Technologies & Aerospace Collection
ProQuest Biological Science Collection
ProQuest One Academic Eastern Edition
ProQuest Hospital Collection
ProQuest Technology Collection
Health Research Premium Collection (Alumni)
Biological Science Database
Ecology Abstracts
ProQuest Hospital Collection (Alumni)
Biotechnology and BioEngineering Abstracts
Entomology Abstracts
ProQuest Health & Medical Complete
ProQuest One Academic UKI Edition
Engineering Research Database
ProQuest One Academic
Calcium & Calcified Tissue Abstracts
ProQuest One Academic (New)
Technology Collection
Technology Research Database
ProQuest One Academic Middle East (New)
ProQuest Health & Medical Complete (Alumni)
ProQuest Central (Alumni Edition)
ProQuest One Community College
ProQuest One Health & Nursing
ProQuest Natural Science Collection
ProQuest Pharma Collection
ProQuest Central
ProQuest Health & Medical Research Collection
Genetics Abstracts
Health and Medicine Complete (Alumni Edition)
ProQuest Central Korea
Bacteriology Abstracts (Microbiology B)
AIDS and Cancer Research Abstracts
ProQuest SciTech Collection
Advanced Technologies & Aerospace Database
ProQuest Medical Library
Immunology Abstracts
Environment Abstracts
ProQuest Central (Alumni)
MEDLINE - Academic
DatabaseTitleList MEDLINE - Academic
MEDLINE
CrossRef
Publicly Available Content Database
Database_xml – sequence: 1
  dbid: C6C
  name: Springer Nature OA Free Journals
  url: http://www.springeropen.com/
  sourceTypes: Publisher
– sequence: 2
  dbid: DOA
  name: DOAJ Directory of Open Access Journals
  url: https://www.doaj.org/
  sourceTypes: Open Website
– sequence: 3
  dbid: NPM
  name: PubMed
  url: https://proxy.k.utb.cz/login?url=http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed
  sourceTypes: Index Database
– sequence: 4
  dbid: EIF
  name: MEDLINE
  url: https://proxy.k.utb.cz/login?url=https://www.webofscience.com/wos/medline/basic-search
  sourceTypes: Index Database
– sequence: 5
  dbid: 8FG
  name: ProQuest Technology Collection
  url: https://search.proquest.com/technologycollection1
  sourceTypes: Aggregation Database
DeliveryMethod fulltext_linktorsrc
Discipline Biology
EISSN 2041-1723
EndPage 19
ExternalDocumentID oai_doaj_org_article_5cf8fb6bd7804fb7b16f52bcbcad623f
PMC9378660
35970984
10_1038_s41467_022_32381_2
Genre Research Support, Non-U.S. Gov't
Journal Article
Research Support, N.I.H., Extramural
GrantInformation_xml – fundername: U.S. Department of Health & Human Services | NIH | National Institute of Mental Health (NIMH)
  grantid: MH119735; MH104605
  funderid: https://doi.org/10.13039/100000025
– fundername: U.S. Department of Health & Human Services | NIH | National Institute of Mental Health (NIMH)
– fundername: NIMH NIH HHS
  grantid: DP2 MH119735
– fundername: NIMH NIH HHS
  grantid: U54 MH091657
– fundername: NIMH NIH HHS
  grantid: R01 MH115357
– fundername: NIDA NIH HHS
  grantid: U01 DA041148
– fundername: NIMH NIH HHS
  grantid: R01 MH096773
– fundername: NINDS NIH HHS
  grantid: K23 NS088590
– fundername: NIMH NIH HHS
  grantid: K99 MH104605
– fundername: NIMH NIH HHS
  grantid: R00 MH104605
– fundername: ;
– fundername: ;
  grantid: MH119735; MH104605
GroupedDBID ---
0R~
39C
3V.
53G
5VS
70F
7X7
88E
8AO
8FE
8FG
8FH
8FI
8FJ
AAHBH
AAJSJ
ABUWG
ACGFO
ACGFS
ACIWK
ACMJI
ACPRK
ACSMW
ADBBV
ADFRT
ADMLS
ADRAZ
AENEX
AEUYN
AFKRA
AFRAH
AHMBA
AJTQC
ALIPV
ALMA_UNASSIGNED_HOLDINGS
AMTXH
AOIJS
ARAPS
ASPBG
AVWKF
AZFZN
BBNVY
BCNDV
BENPR
BGLVJ
BHPHI
BPHCQ
BVXVI
C6C
CCPQU
DIK
EBLON
EBS
EE.
EMOBN
F5P
FEDTE
FYUFA
GROUPED_DOAJ
HCIFZ
HMCUK
HVGLF
HYE
HZ~
KQ8
LK8
M1P
M48
M7P
M~E
NAO
O9-
OK1
P2P
P62
PIMPY
PQQKQ
PROAC
PSQYO
RNS
RNT
RNTTT
RPM
SNYQT
SV3
TSG
UKHRP
AASML
AAYXX
CITATION
PHGZM
PHGZT
CGR
CUY
CVF
ECM
EIF
NPM
7QL
7QP
7QR
7SN
7SS
7ST
7T5
7T7
7TM
7TO
7XB
8FD
8FK
AARCD
AZQEC
C1K
DWQXO
FR3
GNUQQ
H94
K9.
P64
PJZUB
PKEHL
PPXIY
PQEST
PQGLB
PQUKI
PRINS
RC3
SOI
7X8
5PM
PUEGO
ID FETCH-LOGICAL-c606t-490ae90db42ccfc73e10c6ae93c8e533f7467d2ec26702565eb25437ff14e7793
IEDL.DBID M48
ISSN 2041-1723
IngestDate Wed Aug 27 01:22:00 EDT 2025
Thu Aug 21 14:07:08 EDT 2025
Fri Jul 11 09:29:30 EDT 2025
Wed Aug 13 09:13:31 EDT 2025
Thu Apr 03 06:51:33 EDT 2025
Tue Jul 01 00:58:22 EDT 2025
Thu Apr 24 22:50:46 EDT 2025
Fri Feb 21 02:38:49 EST 2025
IsDoiOpenAccess true
IsOpenAccess true
IsPeerReviewed true
IsScholarly true
Issue 1
Language English
License 2022. The Author(s).
Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
LinkModel DirectLink
MergedId FETCHMERGED-LOGICAL-c606t-490ae90db42ccfc73e10c6ae93c8e533f7467d2ec26702565eb25437ff14e7793
Notes ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 14
content type line 23
ORCID 0000-0002-6876-7078
0000-0002-5307-2249
0000-0003-1762-5499
0000-0001-8602-393X
OpenAccessLink https://www.proquest.com/docview/2702358801?pq-origsite=%requestingapplication%
PMID 35970984
PQID 2702358801
PQPubID 546298
PageCount 19
ParticipantIDs doaj_primary_oai_doaj_org_article_5cf8fb6bd7804fb7b16f52bcbcad623f
pubmedcentral_primary_oai_pubmedcentral_nih_gov_9378660
proquest_miscellaneous_2702975502
proquest_journals_2702358801
pubmed_primary_35970984
crossref_primary_10_1038_s41467_022_32381_2
crossref_citationtrail_10_1038_s41467_022_32381_2
springer_journals_10_1038_s41467_022_32381_2
ProviderPackageCode CITATION
AAYXX
PublicationCentury 2000
PublicationDate 2022-08-15
PublicationDateYYYYMMDD 2022-08-15
PublicationDate_xml – month: 08
  year: 2022
  text: 2022-08-15
  day: 15
PublicationDecade 2020
PublicationPlace London
PublicationPlace_xml – name: London
– name: England
PublicationTitle Nature communications
PublicationTitleAbbrev Nat Commun
PublicationTitleAlternate Nat Commun
PublicationYear 2022
Publisher Nature Publishing Group UK
Nature Publishing Group
Nature Portfolio
Publisher_xml – name: Nature Publishing Group UK
– name: Nature Publishing Group
– name: Nature Portfolio
References Behzadi, Restom, Liau, Liu (CR95) 2007; 37
Keilholz (CR87) 2014
Greve, Fischl (CR104) 2009; 48
Smith (CR27) 2013; 80
van den Heuvel, Sporns (CR74) 2013; 17
Choe (CR56) 2015; 10
Yeo (CR21) 2011; 106
Gordon (CR76) 2016; 26
Majeed (CR79) 2011; 54
Singh, Mémoli, Carlsson (CR66) 2007
Lake (CR46) 2020; 17
Bengio, Courville, Vincent (CR114) 2013; 35
Glasser (CR93) 2016; 19
Ringach (CR1) 2009; 19
Gordon (CR57) 2017; 95
Du (CR86) 2018
Fu (CR17) 2021; 224
Reinen (CR81) 2018; 9
Glasser (CR22) 2016; 536
Phinyomark, Ibanez-Marcelo, Petri (CR67) 2017; 3
CR47
Sporns, Honey, Kötter (CR73) 2007; 2
Luczak, Barthó, Harris (CR7) 2009; 62
Smith (CR94) 2004; 23
Faskowitz, Esfahlani, Jo, Sporns, Betzel (CR37) 2020; 23
Demirtas (CR61) 2016; 37
Liégeois (CR31) 2019; 10
Van Der Maaten, Hinton (CR111) 2008; 9
Roberts (CR26) 2019; 10
Anderson, Ferguson, Lopez-Larson, Yurgelun-Todd (CR55) 2011; 32
Power, Barnes, Snyder, Schlaggar, Petersen (CR106) 2012
Valdes, Jimenez, Riera, Biscay, Ozaki (CR14) 1999; 81
Sui, Jiang, Bustillo, Calhoun (CR18) 2020; 88
Lum (CR64) 2013; 3
Esteban (CR100) 2019; 16
Lurie (CR35) 2020; 4
Laumann (CR58) 2015; 87
Chen, Geisler, Seidemann (CR3) 2006; 9
Lindquist, Xu, Nebel, Caffo (CR49) 2014; 101
Parrish, Gitelman, LaBar, Mesulam (CR54) 2000; 44
Fair (CR98) 2020; 208
DiCarlo, Zoccolan, Rust (CR110) 2012; 73
Ma (CR45) 2016; 113
Shine (CR41) 2019; 22
Smith (CR115) 2013; 17
Stringer (CR4) 2019; 364
Margulies (CR84) 2016; 113
CR69
Dosenbach, Fair, Cohen, Schlaggar, Petersen (CR25) 2008; 12
van den Heuvel, Bullmore, Sporns (CR70) 2016; 20
Mann, Deny, Ganguli, Clandinin (CR83) 2021; 593
Fair (CR23) 2009; 5
Zalesky, Fornito, Cocchi, Gollo, Breakspear (CR32) 2014; 111
Barttfelda (CR9) 2015; 112
Huys, Maia, Frank (CR16) 2016; 19
Glasser (CR99) 2013; 80
Filippini (CR20) 2009; 106
Casorso (CR38) 2019; 194
Lynch (CR88) 2020; 33
Rashid, Damaraju, Pearlson, Calhoun (CR62) 2014; 8
CR75
Muller (CR42) 2016; 5
CR72
Power, Barnes, Snyder, Schlaggar, Petersen (CR97) 2012; 59
CR112
Arieli, Shoham, Hildesheim, Grinvald (CR2) 1995; 73
Raut, Mitra, Snyder, Raichle (CR96) 2019; 194
Friston, Williams, Howard, Frackowiak, Turner (CR107) 1996; 35
Esfahlani (CR78) 2020; 117
Power (CR108) 2014; 84
CR89
Casey (CR90) 2018; 32
Van Essen (CR92) 2013; 80
Hansen, Battaglia, Spiegler, Deco, Jirsa (CR10) 2015; 105
Avants, Epstein, Grossman, Gee (CR102) 2008; 12
Jenkinson, Bannister, Brady, Smith (CR105) 2002; 17
Shine (CR50) 2015; 122
O’Neill, Pleydell-Bouverie, Dupret, Csicsvari (CR5) 2010; 33
Bassett (CR71) 2016; 139
Chen, Glover (CR19) 2015; 25
CR80
Saggar (CR33) 2018; 9
Berkes, Orbán, Lengyel, Fiser (CR6) 2011; 331
Saggar, Uddin (CR15) 2019; 6
Damaraju (CR60) 2014; 5
Prichard, Theiler (CR68) 1994; 73
Feinberg (CR28) 2010; 5
Shine (CR40) 2016; 92
Calhoun, Miller, Pearlson, Adali (CR48) 2014; 84
van der Meer, Breakspear, Chang, Sonkusare, Cocchi (CR77) 2020; 11
Kundu, Inati, Evans, Luh, Bandettini (CR29) 2012; 60
Breakspear (CR82) 2017; 20
Tagliazucchi, von Wegner, Morzelewski, Brodbeck, Laufs (CR53) 2012; 6
Baker (CR39) 2014; 3
Sourty (CR63) 2016; 10
Laumann (CR43) 2016
Dosenbach (CR24) 2007; 104
CR91
Tustison (CR101) 2010; 29
Liégeois, Laumann, Snyder, Zhou, Yeo (CR44) 2017; 163
Fernandez (CR11) 2017; 27
Geniesse, Sporns, Petri, Saggar (CR34) 2019; 3
Zhang, Brady, Smith (CR103) 2001; 20
Freyer, Aquino, Robinson, Ritter, Breakspear (CR13) 2009; 29
Carlsson (CR65) 2009; 46
O’Connor (CR59) 2017; 6
Freyer, Roberts, Ritter, Breakspear (CR12) 2012; 8
Liu, Chang, Duyn (CR51) 2013; 7
Han, Caporale, Dan (CR8) 2008; 60
Preti, Bolton, Van De Ville (CR30) 2016
Vidaurre, Smith, Woolrich (CR36) 2017; 114
Petridou, Gaudes, Dryden, Francis, Gowland (CR52) 2013; 34
Liu, Duyn (CR85) 2013; 110
CR109
Roweis, Saul (CR113) 2000; 290
JM Shine (32381_CR40) 2016; 92
M Sourty (32381_CR63) 2016; 10
DS Bassett (32381_CR71) 2016; 139
NUF Dosenbach (32381_CR25) 2008; 12
MF Glasser (32381_CR22) 2016; 536
AS Choe (32381_CR56) 2015; 10
DL Ringach (32381_CR1) 2009; 19
JE Chen (32381_CR19) 2015; 25
R Liégeois (32381_CR44) 2017; 163
EM Gordon (32381_CR57) 2017; 95
B Rashid (32381_CR62) 2014; 8
J O’Neill (32381_CR5) 2010; 33
JN van der Meer (32381_CR77) 2020; 11
D Vidaurre (32381_CR36) 2017; 114
32381_CR89
N Petridou (32381_CR52) 2013; 34
TO Laumann (32381_CR58) 2015; 87
O Esteban (32381_CR100) 2019; 16
A Zalesky (32381_CR32) 2014; 111
32381_CR91
J Faskowitz (32381_CR37) 2020; 23
Y Behzadi (32381_CR95) 2007; 37
A Luczak (32381_CR7) 2009; 62
DA Feinberg (32381_CR28) 2010; 5
MP van den Heuvel (32381_CR74) 2013; 17
JA Roberts (32381_CR26) 2019; 10
DS Margulies (32381_CR84) 2016; 113
J Sui (32381_CR18) 2020; 88
EM Gordon (32381_CR76) 2016; 26
C Geniesse (32381_CR34) 2019; 3
BB Avants (32381_CR102) 2008; 12
L Van Der Maaten (32381_CR111) 2008; 9
PA Valdes (32381_CR14) 1999; 81
MP van den Heuvel (32381_CR70) 2016; 20
JD Power (32381_CR106) 2012
ST Roweis (32381_CR113) 2000; 290
JM Shine (32381_CR41) 2019; 22
M Jenkinson (32381_CR105) 2002; 17
M Demirtas (32381_CR61) 2016; 37
G Carlsson (32381_CR65) 2009; 46
JS Anderson (32381_CR55) 2011; 32
D O’Connor (32381_CR59) 2017; 6
FZ Esfahlani (32381_CR78) 2020; 117
X Liu (32381_CR85) 2013; 110
QJM Huys (32381_CR16) 2016; 19
DN Greve (32381_CR104) 2009; 48
AP Baker (32381_CR39) 2014; 3
Y Bengio (32381_CR114) 2013; 35
P Berkes (32381_CR6) 2011; 331
Y Ma (32381_CR45) 2016; 113
JM Reinen (32381_CR81) 2018; 9
C Stringer (32381_CR4) 2019; 364
TO Laumann (32381_CR43) 2016
SM Smith (32381_CR94) 2004; 23
Y Chen (32381_CR3) 2006; 9
NUF Dosenbach (32381_CR24) 2007; 104
Y Zhang (32381_CR103) 2001; 20
Z Fu (32381_CR17) 2021; 224
N Filippini (32381_CR20) 2009; 106
JD Power (32381_CR97) 2012; 59
M Saggar (32381_CR33) 2018; 9
DJ Lurie (32381_CR35) 2020; 4
DA Fair (32381_CR98) 2020; 208
PY Lum (32381_CR64) 2013; 3
KJ Friston (32381_CR107) 1996; 35
F Freyer (32381_CR12) 2012; 8
F Freyer (32381_CR13) 2009; 29
R Liégeois (32381_CR31) 2019; 10
J Casorso (32381_CR38) 2019; 194
BTT Yeo (32381_CR21) 2011; 106
32381_CR47
RV Raut (32381_CR96) 2019; 194
DC Van Essen (32381_CR92) 2013; 80
SD Keilholz (32381_CR87) 2014
A Phinyomark (32381_CR67) 2017; 3
Y Du (32381_CR86) 2018
SM Smith (32381_CR27) 2013; 80
W Majeed (32381_CR79) 2011; 54
A Arieli (32381_CR2) 1995; 73
E Tagliazucchi (32381_CR53) 2012; 6
P Kundu (32381_CR29) 2012; 60
JM Shine (32381_CR50) 2015; 122
DA Fair (32381_CR23) 2009; 5
32381_CR80
32381_CR109
JD Power (32381_CR108) 2014; 84
L Muller (32381_CR42) 2016; 5
MA Lindquist (32381_CR49) 2014; 101
CJ Lynch (32381_CR88) 2020; 33
D Prichard (32381_CR68) 1994; 73
MF Glasser (32381_CR99) 2013; 80
MF Glasser (32381_CR93) 2016; 19
M Breakspear (32381_CR82) 2017; 20
ECA Hansen (32381_CR10) 2015; 105
K Mann (32381_CR83) 2021; 593
G Singh (32381_CR66) 2007
F Han (32381_CR8) 2008; 60
MG Preti (32381_CR30) 2016
X Liu (32381_CR51) 2013; 7
BJ Casey (32381_CR90) 2018; 32
TB Parrish (32381_CR54) 2000; 44
O Sporns (32381_CR73) 2007; 2
LMJ Fernandez (32381_CR11) 2017; 27
EMR Lake (32381_CR46) 2020; 17
32381_CR69
NJ Tustison (32381_CR101) 2010; 29
P Barttfelda (32381_CR9) 2015; 112
32381_CR75
E Damaraju (32381_CR60) 2014; 5
VD Calhoun (32381_CR48) 2014; 84
32381_CR72
SM Smith (32381_CR115) 2013; 17
JJ DiCarlo (32381_CR110) 2012; 73
M Saggar (32381_CR15) 2019; 6
32381_CR112
References_xml – volume: 10
  start-page: 1
  year: 2019
  end-page: 9
  ident: CR31
  article-title: Resting brain dynamics at different timescales capture distinct aspects of human behavior
  publication-title: Nat. Commun.
  doi: 10.1038/s41467-019-10317-7
– volume: 23
  start-page: S208
  year: 2004
  end-page: S219
  ident: CR94
  article-title: Advances in functional and structural MR image analysis and implementation as FSL
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2004.07.051
– year: 2016
  ident: CR30
  article-title: The dynamic functional connectome: State-of-the-art and perspectives
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2016.12.061
– volume: 111
  start-page: 10341
  year: 2014
  end-page: 10346
  ident: CR32
  article-title: Time-resolved resting-state brain networks
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1400181111
– volume: 80
  start-page: 62
  year: 2013
  end-page: 79
  ident: CR92
  article-title: The WU-Minn human connectome project: an overview
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2013.05.041
– volume: 290
  start-page: 2323
  year: 2000
  end-page: 2326
  ident: CR113
  article-title: Nonlinear dimensionality reduction by locally linear embedding
  publication-title: Sci. (80-.).
  doi: 10.1126/science.290.5500.2323
– volume: 26
  start-page: 288
  year: 2016
  end-page: 303
  ident: CR76
  article-title: Generation and evaluation of a cortical area parcellation from resting-state correlations
  publication-title: Cereb. Cortex
  doi: 10.1093/cercor/bhu239
– volume: 73
  start-page: 415
  year: 2012
  end-page: 434
  ident: CR110
  article-title: How does the brain solve visual object recognition?
  publication-title: Neuron
  doi: 10.1016/j.neuron.2012.01.010
– volume: 117
  start-page: 28393
  year: 2020
  end-page: 28401
  ident: CR78
  article-title: High-amplitude cofluctuations in cortical activity drive functional connectivity
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.2005531117
– volume: 33
  start-page: 108540
  year: 2020
  ident: CR88
  article-title: Rapid precision functional mapping of individuals using multi-echo fMRI
  publication-title: Cell Rep.
  doi: 10.1016/j.celrep.2020.108540
– ident: CR80
– volume: 10
  start-page: e0140134
  year: 2015
  ident: CR56
  article-title: Reproducibility and temporal structure in weekly resting-state fMRI over a period of 3.5 Years
  publication-title: PLoS ONE
  doi: 10.1371/journal.pone.0140134
– volume: 12
  start-page: 26
  year: 2008
  end-page: 41
  ident: CR102
  article-title: Symmetric diffeomorphic image registration with cross-correlation: evaluating automated labeling of elderly and neurodegenerative brain
  publication-title: Med. Image Anal.
  doi: 10.1016/j.media.2007.06.004
– volume: 194
  start-page: 42
  year: 2019
  end-page: 54
  ident: CR38
  article-title: Dynamic mode decomposition of resting-state and task fMRI
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2019.03.019
– volume: 3
  start-page: e01867
  year: 2014
  ident: CR39
  article-title: Fast transient networks in spontaneous human brain activity
  publication-title: Elife
  doi: 10.7554/eLife.01867
– volume: 35
  start-page: 346
  year: 1996
  end-page: 355
  ident: CR107
  article-title: Movement-related effects in fMRI time-series
  publication-title: Magn. Reson. Med.
  doi: 10.1002/mrm.1910350312
– volume: 8
  start-page: 897
  year: 2014
  ident: CR62
  article-title: Dynamic connectivity states estimated from resting fMRI Identify differences among Schizophrenia, bipolar disorder, and healthy control subjects
  publication-title: Front. Hum. Neurosci.
  doi: 10.3389/fnhum.2014.00897
– volume: 139
  start-page: 3048
  year: 2016
  end-page: 3049
  ident: CR71
  article-title: Brain network analysis: a practical tutorial
  publication-title: Brain
  doi: 10.1093/brain/aww232
– volume: 81
  start-page: 415
  year: 1999
  end-page: 424
  ident: CR14
  article-title: Nonlinear EEG analysis based on a neural mass model
  publication-title: Biol. Cybern.
  doi: 10.1007/s004220050572
– volume: 112
  start-page: 887
  year: 2015
  end-page: 892
  ident: CR9
  article-title: Signature of consciousness in the dynamics of resting-state brain activity
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1418031112
– volume: 9
  start-page: 11
  year: 2008
  ident: CR111
  article-title: Visualizing data using t-SNE
  publication-title: J. Mach. Learn. Res.
– volume: 25
  start-page: 289
  year: 2015
  end-page: 313
  ident: CR19
  article-title: Functional magnetic resonance imaging methods
  publication-title: Neuropsychol. Rev.
  doi: 10.1007/s11065-015-9294-9
– ident: CR112
– volume: 17
  start-page: 1262
  year: 2020
  end-page: 1271
  ident: CR46
  article-title: Simultaneous cortex-wide fluorescence Ca2+ imaging and whole-brain fMRI
  publication-title: Nat. Methods
  doi: 10.1038/s41592-020-00984-6
– volume: 87
  start-page: 657
  year: 2015
  end-page: 670
  ident: CR58
  article-title: Functional system and areal organization of a highly sampled individual human brain
  publication-title: Neuron
  doi: 10.1016/j.neuron.2015.06.037
– volume: 11
  start-page: 1
  year: 2020
  end-page: 14
  ident: CR77
  article-title: Movie viewing elicits rich and reliable brain state dynamics
  publication-title: Nat. Commun.
  doi: 10.1038/s41467-020-18717-w
– volume: 9
  start-page: 1
  year: 2018
  end-page: 15
  ident: CR81
  article-title: The human cortex possesses a reconfigurable dynamic network architecture that is disrupted in psychosis
  publication-title: Nat. Commun.
  doi: 10.1038/s41467-018-03462-y
– volume: 106
  start-page: 1125
  year: 2011
  end-page: 1165
  ident: CR21
  article-title: The organization of the human cerebral cortex estimated by intrinsic functional connectivity
  publication-title: J. Neurophysiol.
  doi: 10.1152/jn.00338.2011
– ident: CR109
– volume: 29
  start-page: 8512
  year: 2009
  end-page: 8524
  ident: CR13
  article-title: Bistability and non-Gaussian fluctuations in spontaneous cortical activity
  publication-title: J. Neurosci.
  doi: 10.1523/JNEUROSCI.0754-09.2009
– volume: 32
  start-page: 43
  year: 2018
  end-page: 54
  ident: CR90
  article-title: The adolescent brain cognitive development (ABCD) study: imaging acquisition across 21 sites
  publication-title: Dev. Cogn. Neurosci.
  doi: 10.1016/j.dcn.2018.03.001
– volume: 5
  start-page: e17267
  year: 2016
  ident: CR42
  article-title: Rotating waves during human sleep spindles organize global patterns of activity that repeat precisely through the night
  publication-title: Elife
  doi: 10.7554/eLife.17267
– ident: CR91
– ident: CR47
– volume: 122
  start-page: 399
  year: 2015
  end-page: 407
  ident: CR50
  article-title: Estimation of dynamic functional connectivity using multiplication of temporal derivatives
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2015.07.064
– ident: CR72
– volume: 6
  start-page: 339
  year: 2012
  ident: CR53
  article-title: Dynamic BOLD functional connectivity in humans and its electrophysiological correlates
  publication-title: Front. Hum. Neurosci.
  doi: 10.3389/fnhum.2012.00339
– volume: 88
  start-page: 818
  year: 2020
  end-page: 828
  ident: CR18
  article-title: Neuroimaging-based individualized prediction of cognition and behavior for mental disorders and health: methods and promises
  publication-title: Biol. Psychiatry.
  doi: 10.1016/j.biopsych.2020.02.016
– volume: 114
  start-page: 12827
  year: 2017
  end-page: 12832
  ident: CR36
  article-title: Brain network dynamics are hierarchically organized in time
  publication-title: Proc. Natl. Acad. Sci. USA
  doi: 10.1073/pnas.1705120114
– volume: 593
  start-page: 244
  year: 2021
  end-page: 248
  ident: CR83
  article-title: Coupling of activity, metabolism and behaviour across the Drosophila brain
  publication-title: Nature
  doi: 10.1038/s41586-021-03497-0
– year: 2018
  ident: CR86
  article-title: Dynamic functional connectivity impairments in early schizophrenia and clinical high-risk for psychosis
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2017.10.022
– volume: 12
  start-page: 99
  year: 2008
  end-page: 105
  ident: CR25
  article-title: A dual-networks architecture of top-down control
  publication-title: Trends Cogn. Sci.
  doi: 10.1016/j.tics.2008.01.001
– volume: 95
  start-page: 791
  year: 2017
  end-page: 807.e7
  ident: CR57
  article-title: Precision functional mapping of individual human brains
  publication-title: Neuron
  doi: 10.1016/j.neuron.2017.07.011
– volume: 37
  start-page: 90
  year: 2007
  end-page: 101
  ident: CR95
  article-title: A component based noise correction method (CompCor) for BOLD and perfusion based fMRI
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2007.04.042
– volume: 9
  start-page: 1
  year: 2018
  end-page: 14
  ident: CR33
  article-title: Towards a new approach to reveal dynamical organization of the brain using topological data analysis
  publication-title: Nat. Commun.
  doi: 10.1038/s41467-018-03664-4
– ident: CR89
– volume: 20
  start-page: 345
  year: 2016
  end-page: 361
  ident: CR70
  article-title: Comparative connectomics
  publication-title: Trends Cogn. Sci.
  doi: 10.1016/j.tics.2016.03.001
– volume: 4
  start-page: 30
  year: 2020
  end-page: 69
  ident: CR35
  article-title: Questions and controversies in the study of time-varying functional connectivity in resting fMRI
  publication-title: Netw. Neurosci.
  doi: 10.1162/netn_a_00116
– volume: 163
  start-page: 437
  year: 2017
  end-page: 455
  ident: CR44
  article-title: Interpreting temporal fluctuations in resting-state functional connectivity MRI
  publication-title: NeuroImage.
  doi: 10.1016/j.neuroimage.2017.09.012
– volume: 113
  start-page: E8463
  year: 2016
  end-page: E8471
  ident: CR45
  article-title: Resting-state hemodynamics are spatiotemporally coupled to synchronized and symmetric neural activity in excitatory neurons
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1525369113
– volume: 113
  start-page: 12574
  year: 2016
  end-page: 12579
  ident: CR84
  article-title: Situating the default-mode network along a principal gradient of macroscale cortical organization
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1608282113
– volume: 194
  start-page: 211
  year: 2019
  end-page: 227
  ident: CR96
  article-title: On time delay estimation and sampling error in resting-state fMRI
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2019.03.020
– volume: 5
  start-page: e15710
  year: 2010
  ident: CR28
  article-title: Multiplexed echo planar imaging for sub-second whole brain FMRI and fast diffusion imaging
  publication-title: PLoS ONE
  doi: 10.1371/journal.pone.0015710
– volume: 6
  start-page: 6
  year: 2019
  ident: CR15
  article-title: Pushing the boundaries of psychiatric neuroimaging to ground diagnosis in biology
  publication-title: eNeuro
  doi: 10.1523/ENEURO.0384-19.2019
– volume: 22
  start-page: 289
  year: 2019
  end-page: 296
  ident: CR41
  article-title: Human cognition involves the dynamic integration of neural activity and neuromodulatory systems
  publication-title: Nat. Neurosci.
  doi: 10.1038/s41593-018-0312-0
– ident: CR69
– volume: 32
  start-page: 548
  year: 2011
  end-page: 555
  ident: CR55
  article-title: Reproducibility of single-subject functional connectivity measurements
  publication-title: Am. J. Neuroradiol.
  doi: 10.3174/ajnr.A2330
– volume: 2
  start-page: e1049
  year: 2007
  ident: CR73
  article-title: Identification and classification of hubs in brain networks
  publication-title: PLoS ONE
  doi: 10.1371/journal.pone.0001049
– volume: 19
  start-page: 439
  year: 2009
  end-page: 444
  ident: CR1
  article-title: Spontaneous and driven cortical activity: implications for computation
  publication-title: Curr. Opin. Neurobiol.
  doi: 10.1016/j.conb.2009.07.005
– volume: 84
  start-page: 320
  year: 2014
  end-page: 341
  ident: CR108
  article-title: Methods to detect, characterize, and remove motion artifact in resting state fMRI
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2013.08.048
– volume: 73
  start-page: 951
  year: 1994
  end-page: 954
  ident: CR68
  article-title: Generating surrogate data for time series with several simultaneously measured variables
  publication-title: Phys. Rev. Lett.
  doi: 10.1103/PhysRevLett.73.951
– volume: 80
  start-page: 105
  year: 2013
  end-page: 124
  ident: CR99
  article-title: The minimal preprocessing pipelines for the Human Connectome Project
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2013.04.127
– volume: 20
  start-page: 340
  year: 2017
  end-page: 352
  ident: CR82
  article-title: Dynamic models of large-scale brain activity
  publication-title: Nat. Neurosci.
  doi: 10.1038/nn.4497
– volume: 5
  start-page: 298
  year: 2014
  end-page: 308
  ident: CR60
  article-title: Dynamic functional connectivity analysis reveals transient states of dysconnectivity in schizophrenia
  publication-title: NeuroImage Clin.
  doi: 10.1016/j.nicl.2014.07.003
– volume: 17
  start-page: 825
  year: 2002
  end-page: 841
  ident: CR105
  article-title: Improved optimization for the robust and accurate linear registration and motion correction of brain images
  publication-title: Neuroimage
  doi: 10.1006/nimg.2002.1132
– volume: 46
  start-page: 255
  year: 2009
  end-page: 308
  ident: CR65
  article-title: Topology and data
  publication-title: Bull. Am. Math. Soc.
  doi: 10.1090/S0273-0979-09-01249-X
– volume: 364
  start-page: 6437
  year: 2019
  ident: CR4
  article-title: Spontaneous behaviors drive multidimensional, brainwide activity
  publication-title: Science (80-.).
  doi: 10.1126/science.aav7893
– volume: 80
  start-page: 144
  year: 2013
  end-page: 168
  ident: CR27
  article-title: Resting-state fMRI in the human connectome project
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2013.05.039
– volume: 10
  start-page: 60
  year: 2016
  ident: CR63
  article-title: Identifying dynamic functional connectivity changes in dementia with Lewy bodies based on product hidden Markov models
  publication-title: Front. Comput. Neurosci.
  doi: 10.3389/fncom.2016.00060
– volume: 9
  start-page: 1412
  year: 2006
  end-page: 1420
  ident: CR3
  article-title: Optimal decoding of correlated neural population responses in the primate visual cortex
  publication-title: Nat. Neurosci.
  doi: 10.1038/nn1792
– volume: 23
  start-page: 1644
  year: 2020
  end-page: 1654
  ident: CR37
  article-title: Edge-centric functional network representations of human cerebral cortex reveal overlapping system-level architecture
  publication-title: Nat. Neurosci.
  doi: 10.1038/s41593-020-00719-y
– year: 2012
  ident: CR106
  article-title: Steps toward optimizing motion artifact removal in functional connectivity MRI; a reply to Carp
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2012.03.017
– volume: 54
  start-page: 1140
  year: 2011
  end-page: 1150
  ident: CR79
  article-title: Spatiotemporal dynamics of low frequency BOLD fluctuations in rats and humans
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2010.08.030
– ident: CR75
– volume: 48
  start-page: 63
  year: 2009
  end-page: 72
  ident: CR104
  article-title: Accurate and robust brain image alignment using boundary-based registration
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2009.06.060
– volume: 17
  start-page: 683
  year: 2013
  end-page: 696
  ident: CR74
  article-title: Network hubs in the human brain
  publication-title: Trends Cogn. Sci.
  doi: 10.1016/j.tics.2013.09.012
– year: 2007
  ident: CR66
  article-title: Topological methods for the analysis of high dimensional data sets and 3D object recognition
  publication-title: Eurograph. Symp. Point-Based Graph.
  doi: 10.2312/SPBG/SPBG07/091-100
– volume: 27
  start-page: 5444
  year: 2017
  end-page: 5462
  ident: CR11
  article-title: Highly dynamic spatiotemporal organization of low-frequency activities during behavioral states in the mouse cerebral cortex
  publication-title: Cereb. Cortex
– volume: 92
  start-page: 544
  year: 2016
  end-page: 554
  ident: CR40
  article-title: The dynamics of functional brain networks: integrated network states during cognitive task performance
  publication-title: Neuron
  doi: 10.1016/j.neuron.2016.09.018
– volume: 8
  start-page: e1002634
  year: 2012
  ident: CR12
  article-title: A Canonical model of multistability and scale-invariance in biological systems
  publication-title: PLoS Comput. Biol.
  doi: 10.1371/journal.pcbi.1002634
– volume: 6
  year: 2017
  ident: CR59
  article-title: The healthy brain network serial scanning initiative: a resource for evaluating inter-individual differences and their reliabilities across scan conditions and sessions
  publication-title: GigaScience
  doi: 10.1093/gigascience/giw011
– volume: 34
  start-page: 1319
  year: 2013
  end-page: 1329
  ident: CR52
  article-title: Periods of rest in fMRI contain individual spontaneous events which are related to slowly fluctuating spontaneous activity
  publication-title: Hum. Brain Mapp.
  doi: 10.1002/hbm.21513
– volume: 19
  start-page: 1175
  year: 2016
  end-page: 1187
  ident: CR93
  article-title: The Human Connectome Project’s neuroimaging approach
  publication-title: Nat. Neurosci.
  doi: 10.1038/nn.4361
– volume: 101
  start-page: 531
  year: 2014
  end-page: 546
  ident: CR49
  article-title: Evaluating dynamic bivariate correlations in resting-state fMRI: a comparison study and a new approach
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2014.06.052
– volume: 35
  start-page: 1798
  year: 2013
  end-page: 1828
  ident: CR114
  article-title: Representation learning: a review and new perspectives
  publication-title: IEEE Trans. Pattern Anal. Mach. Intell.
  doi: 10.1109/TPAMI.2013.50
– volume: 19
  start-page: 404
  year: 2016
  end-page: 413
  ident: CR16
  article-title: Computational psychiatry as a bridge from neuroscience to clinical applications
  publication-title: Nat. Neurosci.
  doi: 10.1038/nn.4238
– volume: 10
  start-page: 1
  year: 2019
  end-page: 17
  ident: CR26
  article-title: Metastable brain waves
  publication-title: Nat. Commun.
  doi: 10.1038/s41467-019-08999-0
– volume: 60
  start-page: 1759
  year: 2012
  end-page: 1770
  ident: CR29
  article-title: Differentiating BOLD and non-BOLD signals in fMRI time series using multi-echo EPI
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2011.12.028
– volume: 29
  start-page: 1310
  year: 2010
  end-page: 1320
  ident: CR101
  article-title: N4ITK: Improved N3 bias correction
  publication-title: IEEE Trans. Med. Imaging
  doi: 10.1109/TMI.2010.2046908
– volume: 3
  start-page: 415
  year: 2017
  end-page: 428
  ident: CR67
  article-title: Resting-State fMRI functional connectivity: big data preprocessing pipelines and topological data analysis.
  publication-title: Big Data
– volume: 105
  start-page: 525
  year: 2015
  end-page: 535
  ident: CR10
  article-title: Functional connectivity dynamics: Modeling the switching behavior of the resting state
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2014.11.001
– volume: 331
  start-page: 83
  year: 2011
  end-page: 87
  ident: CR6
  article-title: Spontaneous cortical activity reveals hallmarks of an optimal internal model of the environment
  publication-title: Science (80-.).
  doi: 10.1126/science.1195870
– volume: 110
  start-page: 4392
  year: 2013
  end-page: 4397
  ident: CR85
  article-title: Time-varying functional network information extracted from brief instances of spontaneous brain activity
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1216856110
– volume: 3
  year: 2013
  ident: CR64
  article-title: Extracting insights from the shape of complex data using topology
  publication-title: Sci. Rep.
  doi: 10.1038/srep01236
– volume: 62
  start-page: 413
  year: 2009
  end-page: 425
  ident: CR7
  article-title: Spontaneous events outline the realm of possible sensory responses in neocortical populations
  publication-title: Neuron
  doi: 10.1016/j.neuron.2009.03.014
– year: 2016
  ident: CR43
  article-title: On the stability of BOLD fMRI correlations
  publication-title: Cereb. Cortex
  doi: 10.1093/cercor/bhw265
– volume: 7
  start-page: 101
  year: 2013
  ident: CR51
  article-title: Decomposition of spontaneous brain activity into distinct fMRI co-activation patterns
  publication-title: Front. Syst. Neurosci.
  doi: 10.3389/fnsys.2013.00101
– volume: 3
  start-page: 763
  year: 2019
  end-page: 778
  ident: CR34
  article-title: Generating dynamical neuroimaging spatiotemporal representations (DyNeuSR) using topological data analysis
  publication-title: Netw. Neurosci.
  doi: 10.1162/netn_a_00093
– volume: 208
  start-page: 116400
  year: 2020
  ident: CR98
  article-title: Correction of respiratory artifacts in MRI head motion estimates
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2019.116400
– volume: 73
  start-page: 2072
  year: 1995
  end-page: 2093
  ident: CR2
  article-title: Coherent spatiotemporal patterns of ongoing activity revealed by realtime optical imaging coupled with single-unit recording in the cat visual cortex
  publication-title: J. Neurophysiol.
  doi: 10.1152/jn.1995.73.5.2072
– volume: 20
  start-page: 45
  year: 2001
  end-page: 57
  ident: CR103
  article-title: Segmentation of brain MR images through a hidden Markov random field model and the expectation-maximization algorithm
  publication-title: IEEE Trans. Med. Imaging
  doi: 10.1109/42.906424
– volume: 60
  start-page: 321
  year: 2008
  end-page: 327
  ident: CR8
  article-title: Reverberation of recent visual experience in spontaneous cortical waves
  publication-title: Neuron
  doi: 10.1016/j.neuron.2008.08.026
– volume: 37
  start-page: 2918
  year: 2016
  end-page: 2930
  ident: CR61
  article-title: Dynamic functional connectivity reveals altered variability in functional connectivity among patients with major depressive disorder
  publication-title: Hum. Brain Mapp.
  doi: 10.1002/hbm.23215
– volume: 44
  start-page: 925
  year: 2000
  end-page: 932
  ident: CR54
  article-title: Impact of signal-to-noise on functional MRI
  publication-title: Magn. Reson. Med.
  doi: 10.1002/1522-2594(200012)44:6<925::AID-MRM14>3.0.CO;2-M
– year: 2014
  ident: CR87
  article-title: Review article: the neural basis of time-varying resting state functional connectivity
  publication-title: Brain Connect.
  doi: 10.1089/brain.2014.0250
– volume: 224
  start-page: 117385
  year: 2021
  ident: CR17
  article-title: Dynamic state with covarying brain activity-connectivity: on the pathophysiology of schizophrenia
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2020.117385
– volume: 84
  start-page: 262
  year: 2014
  end-page: 274
  ident: CR48
  article-title: The chronnectome: time-varying connectivity networks as the next frontier in fMRI data discovery
  publication-title: Neuron
  doi: 10.1016/j.neuron.2014.10.015
– volume: 5
  start-page: e1000381
  year: 2009
  ident: CR23
  article-title: Functional brain networks develop from a ‘local to distributed’ organization
  publication-title: PLoS Comput. Biol.
  doi: 10.1371/journal.pcbi.1000381
– volume: 33
  start-page: 220
  year: 2010
  end-page: 229
  ident: CR5
  article-title: Play it again: reactivation of waking experience and memory
  publication-title: Trends Neurosci.
  doi: 10.1016/j.tins.2010.01.006
– volume: 16
  start-page: 111
  year: 2019
  end-page: 116
  ident: CR100
  article-title: fMRIPrep: a robust preprocessing pipeline for functional MRI
  publication-title: Nat. Methods
  doi: 10.1038/s41592-018-0235-4
– volume: 104
  start-page: 11073
  year: 2007
  end-page: 11078
  ident: CR24
  article-title: Distinct brain networks for adaptive and stable task control in humans
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.0704320104
– volume: 59
  start-page: 2142
  year: 2012
  end-page: 2154
  ident: CR97
  article-title: Spurious but systematic correlations in functional connectivity MRI networks arise from subject motion
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2011.10.018
– volume: 536
  start-page: 171
  year: 2016
  end-page: 178
  ident: CR22
  article-title: A multi-modal parcellation of human cerebral cortex
  publication-title: Nature
  doi: 10.1038/nature18933
– volume: 17
  start-page: 666
  year: 2013
  end-page: 682
  ident: CR115
  article-title: Functional connectomics from resting-state fMRI
  publication-title: Trends Cogn. Sci.
  doi: 10.1016/j.tics.2013.09.016
– volume: 106
  start-page: 7209
  year: 2009
  end-page: 7214
  ident: CR20
  article-title: Distinct patterns of brain activity in young carriers of the APOE-epsilon4 allele
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.0811879106
– volume: 80
  start-page: 105
  year: 2013
  ident: 32381_CR99
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2013.04.127
– year: 2012
  ident: 32381_CR106
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2012.03.017
– ident: 32381_CR109
  doi: 10.1101/074856
– volume: 3
  start-page: 415
  year: 2017
  ident: 32381_CR67
  publication-title: Big Data
– volume: 3
  year: 2013
  ident: 32381_CR64
  publication-title: Sci. Rep.
  doi: 10.1038/srep01236
– volume: 22
  start-page: 289
  year: 2019
  ident: 32381_CR41
  publication-title: Nat. Neurosci.
  doi: 10.1038/s41593-018-0312-0
– volume: 17
  start-page: 666
  year: 2013
  ident: 32381_CR115
  publication-title: Trends Cogn. Sci.
  doi: 10.1016/j.tics.2013.09.016
– volume: 12
  start-page: 99
  year: 2008
  ident: 32381_CR25
  publication-title: Trends Cogn. Sci.
  doi: 10.1016/j.tics.2008.01.001
– volume: 9
  start-page: 1
  year: 2018
  ident: 32381_CR33
  publication-title: Nat. Commun.
  doi: 10.1038/s41467-018-03664-4
– volume: 73
  start-page: 951
  year: 1994
  ident: 32381_CR68
  publication-title: Phys. Rev. Lett.
  doi: 10.1103/PhysRevLett.73.951
– volume: 80
  start-page: 62
  year: 2013
  ident: 32381_CR92
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2013.05.041
– volume: 290
  start-page: 2323
  year: 2000
  ident: 32381_CR113
  publication-title: Sci. (80-.).
  doi: 10.1126/science.290.5500.2323
– volume: 46
  start-page: 255
  year: 2009
  ident: 32381_CR65
  publication-title: Bull. Am. Math. Soc.
  doi: 10.1090/S0273-0979-09-01249-X
– volume: 2
  start-page: e1049
  year: 2007
  ident: 32381_CR73
  publication-title: PLoS ONE
  doi: 10.1371/journal.pone.0001049
– volume: 10
  start-page: 1
  year: 2019
  ident: 32381_CR26
  publication-title: Nat. Commun.
  doi: 10.1038/s41467-019-08999-0
– volume: 32
  start-page: 548
  year: 2011
  ident: 32381_CR55
  publication-title: Am. J. Neuroradiol.
  doi: 10.3174/ajnr.A2330
– volume: 10
  start-page: e0140134
  year: 2015
  ident: 32381_CR56
  publication-title: PLoS ONE
  doi: 10.1371/journal.pone.0140134
– volume: 101
  start-page: 531
  year: 2014
  ident: 32381_CR49
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2014.06.052
– volume: 104
  start-page: 11073
  year: 2007
  ident: 32381_CR24
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.0704320104
– volume: 6
  start-page: 339
  year: 2012
  ident: 32381_CR53
  publication-title: Front. Hum. Neurosci.
  doi: 10.3389/fnhum.2012.00339
– volume: 10
  start-page: 60
  year: 2016
  ident: 32381_CR63
  publication-title: Front. Comput. Neurosci.
  doi: 10.3389/fncom.2016.00060
– volume: 122
  start-page: 399
  year: 2015
  ident: 32381_CR50
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2015.07.064
– volume: 224
  start-page: 117385
  year: 2021
  ident: 32381_CR17
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2020.117385
– ident: 32381_CR69
  doi: 10.1017/nws.2013.8
– volume: 34
  start-page: 1319
  year: 2013
  ident: 32381_CR52
  publication-title: Hum. Brain Mapp.
  doi: 10.1002/hbm.21513
– volume: 11
  start-page: 1
  year: 2020
  ident: 32381_CR77
  publication-title: Nat. Commun.
  doi: 10.1038/s41467-020-18717-w
– volume: 9
  start-page: 11
  year: 2008
  ident: 32381_CR111
  publication-title: J. Mach. Learn. Res.
– volume: 33
  start-page: 220
  year: 2010
  ident: 32381_CR5
  publication-title: Trends Neurosci.
  doi: 10.1016/j.tins.2010.01.006
– volume: 33
  start-page: 108540
  year: 2020
  ident: 32381_CR88
  publication-title: Cell Rep.
  doi: 10.1016/j.celrep.2020.108540
– volume: 88
  start-page: 818
  year: 2020
  ident: 32381_CR18
  publication-title: Biol. Psychiatry.
  doi: 10.1016/j.biopsych.2020.02.016
– volume: 20
  start-page: 345
  year: 2016
  ident: 32381_CR70
  publication-title: Trends Cogn. Sci.
  doi: 10.1016/j.tics.2016.03.001
– volume: 117
  start-page: 28393
  year: 2020
  ident: 32381_CR78
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.2005531117
– volume: 29
  start-page: 8512
  year: 2009
  ident: 32381_CR13
  publication-title: J. Neurosci.
  doi: 10.1523/JNEUROSCI.0754-09.2009
– year: 2018
  ident: 32381_CR86
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2017.10.022
– volume: 9
  start-page: 1
  year: 2018
  ident: 32381_CR81
  publication-title: Nat. Commun.
  doi: 10.1038/s41467-018-03462-y
– volume: 32
  start-page: 43
  year: 2018
  ident: 32381_CR90
  publication-title: Dev. Cogn. Neurosci.
  doi: 10.1016/j.dcn.2018.03.001
– volume: 48
  start-page: 63
  year: 2009
  ident: 32381_CR104
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2009.06.060
– volume: 80
  start-page: 144
  year: 2013
  ident: 32381_CR27
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2013.05.039
– volume: 208
  start-page: 116400
  year: 2020
  ident: 32381_CR98
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2019.116400
– ident: 32381_CR80
  doi: 10.1101/2021.03.12.435168
– volume: 9
  start-page: 1412
  year: 2006
  ident: 32381_CR3
  publication-title: Nat. Neurosci.
  doi: 10.1038/nn1792
– volume: 37
  start-page: 90
  year: 2007
  ident: 32381_CR95
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2007.04.042
– volume: 17
  start-page: 825
  year: 2002
  ident: 32381_CR105
  publication-title: Neuroimage
  doi: 10.1006/nimg.2002.1132
– volume: 106
  start-page: 7209
  year: 2009
  ident: 32381_CR20
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.0811879106
– year: 2016
  ident: 32381_CR30
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2016.12.061
– volume: 19
  start-page: 404
  year: 2016
  ident: 32381_CR16
  publication-title: Nat. Neurosci.
  doi: 10.1038/nn.4238
– volume: 59
  start-page: 2142
  year: 2012
  ident: 32381_CR97
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2011.10.018
– volume: 3
  start-page: e01867
  year: 2014
  ident: 32381_CR39
  publication-title: Elife
  doi: 10.7554/eLife.01867
– volume: 35
  start-page: 346
  year: 1996
  ident: 32381_CR107
  publication-title: Magn. Reson. Med.
  doi: 10.1002/mrm.1910350312
– volume: 5
  start-page: e15710
  year: 2010
  ident: 32381_CR28
  publication-title: PLoS ONE
  doi: 10.1371/journal.pone.0015710
– volume: 5
  start-page: e1000381
  year: 2009
  ident: 32381_CR23
  publication-title: PLoS Comput. Biol.
  doi: 10.1371/journal.pcbi.1000381
– volume: 5
  start-page: e17267
  year: 2016
  ident: 32381_CR42
  publication-title: Elife
  doi: 10.7554/eLife.17267
– volume: 19
  start-page: 1175
  year: 2016
  ident: 32381_CR93
  publication-title: Nat. Neurosci.
  doi: 10.1038/nn.4361
– volume: 16
  start-page: 111
  year: 2019
  ident: 32381_CR100
  publication-title: Nat. Methods
  doi: 10.1038/s41592-018-0235-4
– volume: 3
  start-page: 763
  year: 2019
  ident: 32381_CR34
  publication-title: Netw. Neurosci.
  doi: 10.1162/netn_a_00093
– ident: 32381_CR89
– year: 2007
  ident: 32381_CR66
  publication-title: Eurograph. Symp. Point-Based Graph.
  doi: 10.2312/SPBG/SPBG07/091-100
– volume: 20
  start-page: 340
  year: 2017
  ident: 32381_CR82
  publication-title: Nat. Neurosci.
  doi: 10.1038/nn.4497
– volume: 84
  start-page: 262
  year: 2014
  ident: 32381_CR48
  publication-title: Neuron
  doi: 10.1016/j.neuron.2014.10.015
– volume: 6
  year: 2017
  ident: 32381_CR59
  publication-title: GigaScience
  doi: 10.1093/gigascience/giw011
– volume: 17
  start-page: 1262
  year: 2020
  ident: 32381_CR46
  publication-title: Nat. Methods
  doi: 10.1038/s41592-020-00984-6
– volume: 114
  start-page: 12827
  year: 2017
  ident: 32381_CR36
  publication-title: Proc. Natl. Acad. Sci. USA
  doi: 10.1073/pnas.1705120114
– volume: 20
  start-page: 45
  year: 2001
  ident: 32381_CR103
  publication-title: IEEE Trans. Med. Imaging
  doi: 10.1109/42.906424
– volume: 10
  start-page: 1
  year: 2019
  ident: 32381_CR31
  publication-title: Nat. Commun.
  doi: 10.1038/s41467-019-10317-7
– volume: 163
  start-page: 437
  year: 2017
  ident: 32381_CR44
  publication-title: NeuroImage.
  doi: 10.1016/j.neuroimage.2017.09.012
– volume: 7
  start-page: 101
  year: 2013
  ident: 32381_CR51
  publication-title: Front. Syst. Neurosci.
  doi: 10.3389/fnsys.2013.00101
– volume: 111
  start-page: 10341
  year: 2014
  ident: 32381_CR32
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1400181111
– volume: 112
  start-page: 887
  year: 2015
  ident: 32381_CR9
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1418031112
– volume: 194
  start-page: 42
  year: 2019
  ident: 32381_CR38
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2019.03.019
– volume: 331
  start-page: 83
  year: 2011
  ident: 32381_CR6
  publication-title: Science (80-.).
  doi: 10.1126/science.1195870
– volume: 54
  start-page: 1140
  year: 2011
  ident: 32381_CR79
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2010.08.030
– year: 2016
  ident: 32381_CR43
  publication-title: Cereb. Cortex
  doi: 10.1093/cercor/bhw265
– volume: 17
  start-page: 683
  year: 2013
  ident: 32381_CR74
  publication-title: Trends Cogn. Sci.
  doi: 10.1016/j.tics.2013.09.012
– ident: 32381_CR72
  doi: 10.1016/C2012-0-06036-X
– volume: 27
  start-page: 5444
  year: 2017
  ident: 32381_CR11
  publication-title: Cereb. Cortex
– volume: 23
  start-page: S208
  year: 2004
  ident: 32381_CR94
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2004.07.051
– volume: 6
  start-page: 6
  year: 2019
  ident: 32381_CR15
  publication-title: eNeuro
  doi: 10.1523/ENEURO.0384-19.2019
– volume: 25
  start-page: 289
  year: 2015
  ident: 32381_CR19
  publication-title: Neuropsychol. Rev.
  doi: 10.1007/s11065-015-9294-9
– volume: 26
  start-page: 288
  year: 2016
  ident: 32381_CR76
  publication-title: Cereb. Cortex
  doi: 10.1093/cercor/bhu239
– volume: 60
  start-page: 1759
  year: 2012
  ident: 32381_CR29
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2011.12.028
– volume: 5
  start-page: 298
  year: 2014
  ident: 32381_CR60
  publication-title: NeuroImage Clin.
  doi: 10.1016/j.nicl.2014.07.003
– volume: 139
  start-page: 3048
  year: 2016
  ident: 32381_CR71
  publication-title: Brain
  doi: 10.1093/brain/aww232
– volume: 35
  start-page: 1798
  year: 2013
  ident: 32381_CR114
  publication-title: IEEE Trans. Pattern Anal. Mach. Intell.
  doi: 10.1109/TPAMI.2013.50
– volume: 4
  start-page: 30
  year: 2020
  ident: 32381_CR35
  publication-title: Netw. Neurosci.
  doi: 10.1162/netn_a_00116
– volume: 95
  start-page: 791
  year: 2017
  ident: 32381_CR57
  publication-title: Neuron
  doi: 10.1016/j.neuron.2017.07.011
– volume: 37
  start-page: 2918
  year: 2016
  ident: 32381_CR61
  publication-title: Hum. Brain Mapp.
  doi: 10.1002/hbm.23215
– volume: 8
  start-page: 897
  year: 2014
  ident: 32381_CR62
  publication-title: Front. Hum. Neurosci.
  doi: 10.3389/fnhum.2014.00897
– volume: 29
  start-page: 1310
  year: 2010
  ident: 32381_CR101
  publication-title: IEEE Trans. Med. Imaging
  doi: 10.1109/TMI.2010.2046908
– volume: 593
  start-page: 244
  year: 2021
  ident: 32381_CR83
  publication-title: Nature
  doi: 10.1038/s41586-021-03497-0
– year: 2014
  ident: 32381_CR87
  publication-title: Brain Connect.
  doi: 10.1089/brain.2014.0250
– volume: 81
  start-page: 415
  year: 1999
  ident: 32381_CR14
  publication-title: Biol. Cybern.
  doi: 10.1007/s004220050572
– ident: 32381_CR112
  doi: 10.1126/science.295.5552.7a
– ident: 32381_CR75
  doi: 10.1017/cbo9780511810633.003
– volume: 536
  start-page: 171
  year: 2016
  ident: 32381_CR22
  publication-title: Nature
  doi: 10.1038/nature18933
– volume: 87
  start-page: 657
  year: 2015
  ident: 32381_CR58
  publication-title: Neuron
  doi: 10.1016/j.neuron.2015.06.037
– volume: 106
  start-page: 1125
  year: 2011
  ident: 32381_CR21
  publication-title: J. Neurophysiol.
  doi: 10.1152/jn.00338.2011
– volume: 44
  start-page: 925
  year: 2000
  ident: 32381_CR54
  publication-title: Magn. Reson. Med.
  doi: 10.1002/1522-2594(200012)44:6<925::AID-MRM14>3.0.CO;2-M
– volume: 105
  start-page: 525
  year: 2015
  ident: 32381_CR10
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2014.11.001
– volume: 8
  start-page: e1002634
  year: 2012
  ident: 32381_CR12
  publication-title: PLoS Comput. Biol.
  doi: 10.1371/journal.pcbi.1002634
– volume: 110
  start-page: 4392
  year: 2013
  ident: 32381_CR85
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1216856110
– volume: 62
  start-page: 413
  year: 2009
  ident: 32381_CR7
  publication-title: Neuron
  doi: 10.1016/j.neuron.2009.03.014
– volume: 364
  start-page: 6437
  year: 2019
  ident: 32381_CR4
  publication-title: Science (80-.).
  doi: 10.1126/science.aav7893
– volume: 84
  start-page: 320
  year: 2014
  ident: 32381_CR108
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2013.08.048
– volume: 23
  start-page: 1644
  year: 2020
  ident: 32381_CR37
  publication-title: Nat. Neurosci.
  doi: 10.1038/s41593-020-00719-y
– volume: 194
  start-page: 211
  year: 2019
  ident: 32381_CR96
  publication-title: Neuroimage
  doi: 10.1016/j.neuroimage.2019.03.020
– volume: 12
  start-page: 26
  year: 2008
  ident: 32381_CR102
  publication-title: Med. Image Anal.
  doi: 10.1016/j.media.2007.06.004
– volume: 19
  start-page: 439
  year: 2009
  ident: 32381_CR1
  publication-title: Curr. Opin. Neurobiol.
  doi: 10.1016/j.conb.2009.07.005
– ident: 32381_CR91
  doi: 10.1016/j.neuroimage.2012.02.018
– volume: 73
  start-page: 2072
  year: 1995
  ident: 32381_CR2
  publication-title: J. Neurophysiol.
  doi: 10.1152/jn.1995.73.5.2072
– volume: 113
  start-page: E8463
  year: 2016
  ident: 32381_CR45
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1525369113
– ident: 32381_CR47
  doi: 10.1101/2021.03.15.435361
– volume: 92
  start-page: 544
  year: 2016
  ident: 32381_CR40
  publication-title: Neuron
  doi: 10.1016/j.neuron.2016.09.018
– volume: 73
  start-page: 415
  year: 2012
  ident: 32381_CR110
  publication-title: Neuron
  doi: 10.1016/j.neuron.2012.01.010
– volume: 60
  start-page: 321
  year: 2008
  ident: 32381_CR8
  publication-title: Neuron
  doi: 10.1016/j.neuron.2008.08.026
– volume: 113
  start-page: 12574
  year: 2016
  ident: 32381_CR84
  publication-title: Proc. Natl Acad. Sci. USA
  doi: 10.1073/pnas.1608282113
SSID ssj0000391844
Score 2.500423
Snippet In the absence of external stimuli, neural activity continuously evolves from one configuration to another. Whether these transitions or explorations follow...
Although spontaneous brain activity is complex and clinically relevant, it is still unclear whether transitions in resting brain activity follow an underlying...
SourceID doaj
pubmedcentral
proquest
pubmed
crossref
springer
SourceType Open Website
Open Access Repository
Aggregation Database
Index Database
Enrichment Source
Publisher
StartPage 4791
SubjectTerms 59/36
631/114/2408
631/378/116/1925
Activity patterns
Brain
Brain - diagnostic imaging
Brain Mapping
Configurations
Data Analysis
External stimuli
Functional magnetic resonance imaging
Humanities and Social Sciences
Humans
Magnetic Resonance Imaging
multidisciplinary
Nerve Net - diagnostic imaging
Science
Science (multidisciplinary)
Topology
SummonAdditionalLinks – databaseName: DOAJ Directory of Open Access Journals
  dbid: DOA
  link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwrV3NSx0xEA9FKHiRttq6aksK3trgbj53j60o4qH0oOAtbL6eUruK7jv43zuT7Hv19fPS4yZZGDIzmRky-f0I2Q8Qd4JQhuGVF5NgU8zxTrGgvQop9FG43OX7RZ-cy9MLdfGE6gt7wgo8cNm4A-VTm5x2AZFykjOu0Ulx553vA4TuhKcvxLwnxVQ-g0UHpYucXsnUoj24l_lMyM3rGKYYX4lEGbD_d1nmr82SP92Y5kB0_IJsTBkk_VQkf0mexeEVeV44JR82yezr3USbQ0Nhm4fF33uEYZhR7HKf0bEQI-QZ7BCl_YRMQhHPCeyR9vRy7tj11bdIRwxmua-L5sdHtB8p8nlskfPjo7PDEzaxKTAPRcrIZFf3sauDk9z75I2ITe01DAnfRkj6EhKPBB491wYTIQU1t5LCpNTIaMCNX5O14WaI24R2AtQhdB2aOkjDQ5dcCAYqRfhsPA8VaRY7a_0ENY6MF9c2X3mL1hZtWNCGzdqwvCIflv_cFqCNv67-jApbrkSQ7DwApmMn07H_Mp2K7C3UbSfPvbf4Pk8oONWairxfToPP4UVKP8SbeVnTGajtQI43xTqWkgio0OqulRUxK3azIurqzHB1mXG9IVNsta4r8nFhYT_E-vNW7PyPrdgl6xxdA7F-1R5ZG-_m8S1kW6N7lx3rEZa7KBg
  priority: 102
  providerName: Directory of Open Access Journals
– databaseName: Health & Medical Collection
  dbid: 7X7
  link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV1Lb9QwELagCIkL4k2gICNxA6uJn8kJAaKqOCAOVNqbFb-2FSVbdrMH_j0zjjfV8uhxY0eazcx4xp7x9xHyOkDcCUIZhiUvJsGmmOOdYkF7FVLoo3C5y_eLPjmVnxdqUQ7cNqWtcrcm5oU6rDyekR_hvSmhwNqad5c_GbJGYXW1UGjcJLcQugxbuszCzGcsiH7eSlnuytSiPdrIvDLkFnYMVozvxaMM2_-vXPPvlsk_6qY5HB3fI3dLHknfT4q_T27E4QG5PTFL_npIll_XhTyHholzHib_6BGMYUmx131Jx4keIY9gnyjtCz4JRVQnsEra07OtYxfn3yMdMaTl7i6aryDRfqTI6vGInB5_-vbxhBVOBeZhqzIy2dV97OrgJPc-eSNiU3sNj4RvI6R-CelHAo-ea4PpkIKdt5LCpNTIaMCZH5ODYTXEp4R2wgUjdB2aOkjDQ5dcCAb2i_Cz8TxUpNl9WesL4DjyXlzYXPgWrZ20YUEbNmvD8oq8md-5nOA2rp39ARU2z0So7PxgtV7a4nlW-dQmp0HWtpbJGdfopLjzzvcBcr9UkcOdum3x3429sraKvJqHwfOwnNIPcbWd5nQGdnggx5PJOmZJBOzT6q6VFTF7drMn6v7IcH6W0b0hX2y1rivydmdhV2L9_1M8u_5fPCd3OBo9YvmqQ3IwrrfxBWRTo3uZXeY3HlUdlw
  priority: 102
  providerName: ProQuest
– databaseName: Springer Nature OA Free Journals
  dbid: C6C
  link: http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwlV3NaxUxEA-lIngRv12tEsGbBrP53D3qw1I8iAcLvYXN12ux7iuv-w7-985kP-RpFTxuMoEhM5OZ2Ux-Q8jrCH4nSm0ZXnkxBTrFvGg1iybomGOXpC9Vvp_Nyan6dKbPDoiY38KUov0CaVmO6bk67N21KiZdas_RyzA4dm8hdDtq9cqslv8qiHjeKDW9j-GyuWHpng8qUP03xZd_lkn-dldaXNDxPXJ3ih3p-5Hb--Qg9Q_I7bGb5I-HZP1lOzXMoXHsMw_E3zsEYFhTrG9f02FsiVBmsDaUdhMmCUUkJ9BE2tHznWeXF98SHdCNlYouWp4d0W6g2MnjETk9_vh1dcKmPgosQHoyMNXyLrU8eiVCyMHKVPNgYEiGJkG4l7HlSBQpCGMxBNKQbWslbc61ShYM-DE57Dd9ekpoK3200vBY86isiG32MVrIEeGzDiJWpJ531oUJZBx7XVy6ctktGzdKw4E0XJGGExV5s6y5GiE2_kn9AQW2UCI8dhnYbNduUhenQ26yN8Brw1X21tcma-GDD12EeC9X5GgWt5ts9trhyzyp4TyrK_JqmQZrwyuUrk-b3UjTWsjqgI8no3YsnEjIzXjbqIrYPb3ZY3V_pr84L4jeECM2xvCKvJ017Bdbf9-KZ_9H_pzcEWgEiOerj8jhsN2lFxBRDf5lMaGfaOAbXQ
  priority: 102
  providerName: Springer Nature
Title Precision dynamical mapping using topological data analysis reveals a hub-like transition state at rest
URI https://link.springer.com/article/10.1038/s41467-022-32381-2
https://www.ncbi.nlm.nih.gov/pubmed/35970984
https://www.proquest.com/docview/2702358801
https://www.proquest.com/docview/2702975502
https://pubmed.ncbi.nlm.nih.gov/PMC9378660
https://doaj.org/article/5cf8fb6bd7804fb7b16f52bcbcad623f
Volume 13
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
link http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwfV1Lb9NAEB6VVqBeEG8MJVokbmCwvS_7gFAaNVSRqCogUm6W95VWBAdSR6L_ntm1HRRIudjyPqTRzszOjHd2PoBXBu2OoVzG_sgrZihTscoKHhuhuXGmslSFLN8zcTplkxmf7UEPd9Qt4NXO0M7jSU1Xi7e_fl5_QIV_314Zz99dsaDuIS_dW6AYt-QDtEzSK-qnzt0POzMtMKBh3d2Z3VMP4Q5FJzspcrZlqkJF_11u6L_ZlH8dqQZLNb4HdzsXkwxbmbgPe7Z-ALdb0MnrhzA_X3W4OsS0cPQ4-Hvl6zTMiU-Dn5OmRU4IPT6FlFRd6RLiCz7hwpGKXKxVvLj8ZknjrV1I_CLhdhKpGuIBPx7BdHzydXQad3ALscYopolZkVS2SIximdZOS2rTRAtsojq36BU6j0xiMqszIb2nxDEo54xK51JmJer5Y9ivl7V9CqSgykgqEpMmhsnMFE4ZIzGUxM9UZyaCtF_ZUne1yD0kxqIMZ-I0L1vGlMiYMjCmzCJ4vZnzo63E8d_Rx55hm5G-inZoWK7mZaeUJdcud0ogrXnCnJIqFY5nSitdGXQLXQRHPbvLXjJLf4GPctz20ghebrpRKf1JS1Xb5bodU0gM_pCOJ610bCjppSsCuSU3W6Ru99SXF6HwN7qSuRBJBG96CftD1s1L8exGEp7DYeZF31f45Uew36zW9gX6WI0awC05k_jMxx8HcDAcTr5M8H18cnb-GVtHYjQIfy8GQcF-A0mEJ3g
linkProvider Scholars Portal
linkToHtml http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwtV1Lb9QwELaqIgQXxJuUAkaCE0R1bCdODgjxqra0VBxaaW8mfm0rSrbdzQr1T_EbmXGSrZZHbz1u7EiznndmPB8hLxz4HSdylWLJK5UgU6nhVZ66wuYuuNoLE7t894vRofw8zsdr5NdwFwbbKgebGA21m1r8Rr6F96ZEDtKWvT09SxE1CqurA4RGJxa7_vwnpGzzNzsfgb8vOd_-dPBhlPaoAqmFYL1NZcVqXzFnJLc2WCV8xmwBj4QtPQQ_AQE4HPeWFwoDghxyz1wKFUImvVI4fAlM_jVwvAw1So3V8psOTlsvpezv5jBRbs1ltESxZR6dY8pX_F-ECfhXbPt3i-Yfddro_rZvk1t93ErfdYJ2h6z55i653iFZnt8jk6-zHqyHug7jHjb_qHH4w4Rib_2Eth0cQ1zBvlRa9_NQKE6RAi2gNT1amPTk-LunLbrQ2E1G45UnWrcUUUTuk8MrOe0HZL2ZNv4RoZUwTomCuYw5qbirgnFOQX4KPzPLXUKy4WS17QecI87GiY6FdlHqjhsauKEjNzRPyKvlO6fdeI9Ld79Hhi134mju-GA6m-he03VuQxlMAbSWTAajTFaEnBtrbO0g1gwJ2RzYrXt7MdcX0p2Q58tl0HQs39SNny66PZWCjBLoeNhJx5ISAXkhq0qZELUiNyukrq40x0dxmjjEp2VRsIS8HiTsgqz_H8XG5f_iGbkxOviyp_d29ncfk5scFQDnCOebZL2dLfwTiORa8zSqDyXfrlpffwMyPVny
linkToPdf http://utb.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwtV1Lb9NAEF5VRSAuiHcNBRYJTmDF3ofXPiAElKilqOqBSrkt3ldaUZKSOEL9a_w6ZtaPKjx66zHetTTZeXtm5yPkhQO_47hUKZa8UgEylRpWydQVVrrgas9N7PI9KHaPxKeJnGyQX_1dGGyr7G1iNNRubvEb-QjvTXEJ0paPQtcWcbgzfnv2I0UEKay09nAarYjs-_OfkL4t3-ztAK9fMjb--OXDbtohDKQWAvcmFVVW-ypzRjBrg1Xc55kt4BG3pYdAKCAYh2PeskJhcCAhD5WCqxBy4ZXCQUxg_q8pLnPUMTVRw_cdnLxeCtHd08l4OVqKaJVi-zw6ypSt-cIIGfCvOPfvds0_arbRFY5vk1tdDEvftUJ3h2z42V1yvUW1PL9HpoeLDriHuhbvHjZ_r3EQxJRin_2UNi00Q1zBHlVad7NRKE6UAo2gNT1emfT05JunDbrT2FlG4_UnWjcUEUXuk6MrOe0HZHM2n_ktQitunOJF5vLMCcVcFYxzCnJV-Jlb5hKS9yerbTfsHDE3TnUsuvNSt9zQwA0duaFZQl4N75y1oz4u3f0eGTbsxDHd8cF8MdWd1mtpQxlMAbSWmQhGmbwIkhlrbO0g7gwJ2e7ZrTvbsdQXkp6Q58MyaD2WcuqZn6_aPZWC7BLoeNhKx0AJhxwxq0qRELUmN2ukrq_MTo7jZHGIVcuiyBLyupewC7L-fxSPLv8Xz8gN0FT9ee9g_zG5yVD-caSw3CabzWLln0BQ15inUXso-XrV6vobX25eKA
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Precision+dynamical+mapping+using+topological+data+analysis+reveals+a+hub-like+transition+state+at+rest&rft.jtitle=Nature+communications&rft.au=Saggar%2C+Manish&rft.au=Shine%2C+James+M&rft.au=Li%C3%A9geois%2C+Rapha%C3%ABl&rft.au=Dosenbach%2C+Nico+U+F&rft.date=2022-08-15&rft.eissn=2041-1723&rft.volume=13&rft.issue=1&rft.spage=4791&rft_id=info:doi/10.1038%2Fs41467-022-32381-2&rft_id=info%3Apmid%2F35970984&rft.externalDocID=35970984
thumbnail_l http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=2041-1723&client=summon
thumbnail_m http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=2041-1723&client=summon
thumbnail_s http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=2041-1723&client=summon