Macromolecular Crowding and Size Effects on Probe Microviscosity

• Published in: Biophysical journal Vol. 95; no. 11; pp. 5362 - 5373
• Main Authors: Goins, Aron B., Sanabria, Hugo, Waxham, M. Neal
• Format: Journal Article
• Language: English
• Published: United States Elsevier Inc 01.12.2008; Biophysical Society; The Biophysical Society
• Subjects: Concentration (composition); Crowding; Density; Dextrans; Dextrans - chemistry; Diffusion; Diffusion rate; Entropy; Intracellular Space - chemistry; Mathematical models; Models, Molecular; Molecules; Size; Spectroscopy, Imaging, Other Techniques; Spectrum analysis; Viscosity
• ISSN: 0006-3495; 1542-0086
• DOI: 10.1529/biophysj.108.131250

Development of biologically relevant crowding solutions necessitates improved understanding of how the relative size and density of mobile obstacles affect probe diffusion. Both the crowding density and relative size of each co-solute in a mixture will contribute to the measured microviscosity as assessed by altered translational mobility. Using multiphoton fluorescent correlation spectroscopy, this study addresses how excluded volume of dextran polymers from 10 to 500 kDa affect microviscosity quantified by measurements of calmodulin labeled with green fluorescent protein as the diffusing probe. Autocorrelation functions were fit using both a multiple-component model with maximum entropy method (MEMFCS) and an anomalous model. Anomalous diffusion was not detected, but fits of the data with the multiple-component model revealed separable modes of diffusion. When the dominant mode of diffusion from the MEMFCS analysis was used, we observed that increased excluded volume slows probe mobility as a simple exponential with crowder concentration. This behavior can be modeled with a single parameter, β, which depends on the dextran size composition. Two additional modes of diffusion were observed using MEMFCS and were interpreted as unique microviscosities. The fast mode corresponded to unhindered free diffusion as in buffer, whereas the slower agreed well with the bulk viscosity. At 10% crowder concentration, one finds a microviscosity approximately three times that of water, which mimics that reported for intracellular viscosity.