Isolation and molecular identification of nematode surface mutants with resistance to bacterial pathogens

• Published in: G3 : genes - genomes - genetics Vol. 13; no. 5
• Main Authors: O’Rourke, Delia, Gravato-Nobre, Maria J, Stroud, Dave, Pritchett, Emily, Barker, Emily, Price, Rebecca L, Robinson, Sarah A, Spiro, Simon, Kuwabara, Patricia, Hodgkin, Jonathan
• Format: Journal Article
• Language: English
• Published: US Oxford University Press 02.05.2023
• Subjects: Animals; Bacteria - metabolism; Caenorhabditis elegans - genetics; Caenorhabditis elegans Proteins - genetics; Glycosylation; Humans; Investigation; Mutation; nematode pathogens; surface genetics; bacterial resistance; glycosyltransferase; Catel–Manzke syndrome; GT92; C. elegans
• ISSN: 2160-1836; 2160-1836
• DOI: 10.1093/g3journal/jkad056

Abstract Numerous mutants of the nematode Caenorhabditis elegans with surface abnormalities have been isolated by utilizing their resistance to a variety of bacterial pathogens (Microbacterium nematophilum, Yersinia pseudotuberculosis, and 2 Leucobacter strains), all of which are able to cause disease or death when worms are grown on bacterial lawns containing these pathogens. Previous work led to the identification of 9 srf or bus genes; here, we report molecular identification and characterization of a further 10 surface-affecting genes. Three of these were found to encode factors implicated in glycosylation (srf-2, bus-5, and bus-22), like several of those previously reported; srf-2 belongs to the GT92 family of putative galactosyltransferases, and bus-5 is homologous to human dTDP-D-glucose 4,6-dehydratase, which is implicated in Catel–Manzke syndrome. Other genes encoded proteins with sequence similarity to phosphatidylinositol phosphatases (bus-6), Patched-related receptors (ptr-15/bus-13), steroid dehydrogenases (dhs-5/bus-21), or glypiation factors (bus-24). Three genes appeared to be nematode-specific (srf-5, bus-10, and bus-28). Many mutants exhibited cuticle fragility as revealed by bleach and detergent sensitivity; this fragility was correlated with increased drug sensitivity, as well as with abnormal skiddy locomotion. Most of the genes examined were found to be expressed in epidermal seam cells, which appear to be important for synthesizing nematode surface coat. The results reveal the genetic and biochemical complexity of this critical surface layer, and provide new tools for its analysis.