GSDS 2.0: an upgraded gene feature visualization server

Visualizing genes’ structure and annotated features helps biologists to investigate their function and evolution intuitively. The Gene Structure Display Server (GSDS) has been widely used by more than 60 000 users since its first publication in 2007. Here, we reported the upgraded GSDS 2.0 with a ne...

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Bibliographic Details
Published inBioinformatics Vol. 31; no. 8; pp. 1296 - 1297
Main Authors Hu, Bo, Jin, Jinpu, Guo, An-Yuan, Zhang, He, Luo, Jingchu, Gao, Ge
Format Journal Article
LanguageEnglish
Published England Oxford University Press 15.04.2015
Subjects
Applications Notes
Bioinformatics
Biologists
Editing
Evolutionary
Format
Genes
Genes - genetics
Genomics - methods
Humans
Internet
Molecular Sequence Annotation - methods
Phylogeny
Servers
Software
Source code
User-Computer Interface
Online AccessGet full text

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Summary:Visualizing genes’ structure and annotated features helps biologists to investigate their function and evolution intuitively. The Gene Structure Display Server (GSDS) has been widely used by more than 60 000 users since its first publication in 2007. Here, we reported the upgraded GSDS 2.0 with a newly designed interface, supports for more types of annotation features and formats, as well as an integrated visual editor for editing the generated figure. Moreover, a user-specified phylogenetic tree can be added to facilitate further evolutionary analysis. The full source code is also available for downloading. Availability and implementation: Web server and source code are freely available at http://gsds.cbi.pku.edu.cn. Contact: gaog@mail.cbi.pku.edu.cn or gsds@mail.cbi.pku.edu.cn Supplementary information: Supplementary data are available at Bioinformatics online.
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The authors wish it to be known that, in their opinion, the first 2 authors should be regarded as Joint First Authors.
Associate Editor: Alfonso Valencia
ISSN:1367-4803
1367-4811
1367-4811
1460-2059
DOI:10.1093/bioinformatics/btu817