Ubiquitination of RIPK1 regulates its activation mediated by TNFR1 and TLRs signaling in distinct manners

• Published in: Nature communications Vol. 11; no. 1; p. 6364
• Main Authors: Li, Xingyan, Zhang, Mengmeng, Huang, Xinyue, Liang, Wei, Li, Ganquan, Lu, Xiaojuan, Li, Yanxia, Pan, Heling, Shi, Linyu, Zhu, Hong, Qian, Lihui, Shan, Bing, Yuan, Junying
• Format: Journal Article
• Language: English
• Published: London Nature Publishing Group UK 11.12.2020; Nature Publishing Group; Nature Portfolio
• Subjects: 13/2; 631/250/249/2510; 631/80/458/582; 631/80/82/23; 631/80/82/2344; 96/21; 96/31; Age; Animals; Antibiotics; Apoptosis; Caspase-1; Cell death; FADD protein; HEK293 Cells; Humanities and Social Sciences; Humans; Inflammation; Inflammation - metabolism; Inflammation - pathology; Intestine; Kinases; Mice; Mice, Knockout; Mortality; multidisciplinary; Mutation; Necroptosis; Necroptosis - physiology; Phosphorylation; Receptor-Interacting Protein Serine-Threonine Kinases - genetics; Receptor-Interacting Protein Serine-Threonine Kinases - metabolism; Receptors, Tumor Necrosis Factor, Type I - genetics; Receptors, Tumor Necrosis Factor, Type I - metabolism; Science; Science (multidisciplinary); Signal Transduction - physiology; Signaling; Splenomegaly; Splenomegaly - pathology; Transcriptome; Tumor necrosis factor receptors; Tumor Necrosis Factor-alpha - metabolism; Tumor necrosis factor-α; Ubiquitination
• ISSN: 2041-1723; 2041-1723
• DOI: 10.1038/s41467-020-19935-y

RIPK1 is a death-domain (DD) containing kinase involved in regulating apoptosis, necroptosis and inflammation. RIPK1 activation is known to be regulated by its DD-mediated interaction and ubiquitination, though underlying mechanisms remain incompletely understood. Here we show that K627 in human RIPK1-DD and its equivalent K612 in murine RIPK1-DD is a key ubiquitination site that regulates the overall ubiquitination pattern of RIPK1 and its DD-mediated interactions with other DD-containing proteins. K627R/K612R mutation inhibits the activation of RIPK1 and blocks both apoptosis and necroptosis mediated by TNFR1 signaling. However, Ripk1 K612R/K612R mutation sensitizes cells to necroptosis and caspase-1 activation in response to TLRs signaling. Ripk1 K612R/K612R mice are viable, but develop age-dependent reduction of RIPK1 expression, spontaneous intestinal inflammation and splenomegaly, which can be rescued by antibiotic treatment and partially by Ripk3 deficiency. Furthermore, we show that the interaction of RIPK1 with FADD contributes to suppressing the activation of RIPK3 mediated by TLRs signaling. Our study demonstrates the distinct roles of K612 ubiquitination in mRIPK1/K627 ubiquitination in hRIPK1 in regulating its pro-death kinase activity in response to TNFα and pro-survival activity in response to TLRs signaling. RIPK1 is a critical kinase which mediates necroptosis, apoptosis and inflammation. Regulation of RIPK1 by ubiquitination is being intensively investigated. Here, the authors made knock-in RIPK1-K612R mice and demonstrate that this mutation alters the RIPK1 ubiquitinylation pattern and inhibits its prodeath kinase activity in response to TNFα but sensitizes cell death to TLRs signals.