The Decision Decoding ToolBOX (DDTBOX) – A Multivariate Pattern Analysis Toolbox for Event-Related Potentials

• Published in: Neuroinformatics (Totowa, N.J.) Vol. 17; no. 1; pp. 27 - 42
• Main Authors: Bode, Stefan, Feuerriegel, Daniel, Bennett, Daniel, Alday, Phillip M.
• Format: Journal Article
• Language: English
• Published: New York Springer US 01.01.2019; Springer Nature B.V
• Subjects: Bioinformatics; Biomedical and Life Sciences; Biomedicine; Brain - physiology; Cognitive ability; Computational Biology/Bioinformatics; Computer Appl. in Life Sciences; EEG; Electroencephalography - methods; Event-related potentials; Evoked Potentials - physiology; Humans; Medical imaging; Multivariate Analysis; Nervous system; Neuroimaging; Neuroimaging - methods; Neurology; Neurosciences; Signal Processing, Computer-Assisted; Software Original; Software Original Article; Support Vector Machine; Support vector machines; Electroencephalography (EEG); Decoding; Multivariate pattern classification analysis (MVPA); Event-related potentials (ERPs); Toolbox
• ISSN: 1539-2791; 1559-0089; 1559-0089
• DOI: 10.1007/s12021-018-9375-z

In recent years, neuroimaging research in cognitive neuroscience has increasingly used multivariate pattern analysis (MVPA) to investigate higher cognitive functions. Here we present DDTBOX, an open-source MVPA toolbox for electroencephalography (EEG) data. DDTBOX runs under MATLAB and is well integrated with the EEGLAB/ERPLAB and Fieldtrip toolboxes (Delorme and Makeig 2004 ; Lopez-Calderon and Luck 2014 ; Oostenveld et al. 2011 ). It trains support vector machines (SVMs) on patterns of event-related potential (ERP) amplitude data, following or preceding an event of interest, for classification or regression of experimental variables. These amplitude patterns can be extracted across space/electrodes (spatial decoding), time (temporal decoding), or both (spatiotemporal decoding). DDTBOX can also extract SVM feature weights, generate empirical chance distributions based on shuffled-labels decoding for group-level statistical testing, provide estimates of the prevalence of decodable information in the population, and perform a variety of corrections for multiple comparisons. It also includes plotting functions for single subject and group results. DDTBOX complements conventional analyses of ERP components, as subtle multivariate patterns can be detected that would be overlooked in standard analyses. It further allows for a more explorative search for information when no ERP component is known to be specifically linked to a cognitive process of interest. In summary, DDTBOX is an easy-to-use and open-source toolbox that allows for characterising the time-course of information related to various perceptual and cognitive processes. It can be applied to data from a large number of experimental paradigms and could therefore be a valuable tool for the neuroimaging community.