Interactive visual analysis of SNP data for rapid autozygosity mapping in consanguineous families

Autozygosity mapping of recessive disorders using small numbers of highly inbred families is a powerful tool for disease gene identification. With the advent of cheap rapid methods for whole‐genome SNP genotyping, data analysis, rather than laboratory work, has become rate‐limiting for this approach...

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Bibliographic Details
Published inHuman mutation Vol. 27; no. 10; pp. 1041 - 1046
Main Authors Carr, Ian M., Flintoff, Kimberley J., Taylor, Graham R., Markham, Alexander F., Bonthron, David T.
Format Journal Article
LanguageEnglish
Published Hoboken Wiley Subscription Services, Inc., A Wiley Company 01.10.2006
Hindawi Limited
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Summary:Autozygosity mapping of recessive disorders using small numbers of highly inbred families is a powerful tool for disease gene identification. With the advent of cheap rapid methods for whole‐genome SNP genotyping, data analysis, rather than laboratory work, has become rate‐limiting for this approach. Here, we describe AutoSNPa, a computer program used for handling and visually presenting large amounts of SNP data, in such a way as to facilitate the rapid identification and subsequent scrutiny of autozygous regions. Hum Mutat 27(10), 1041–1046, 2006. © 2006 Wiley‐Liss, Inc.
Bibliography:istex:9C008240EDD7A909927E996B06477B42644BC406
Department of Health (England and Wales)
ArticleID:HUMU20383
Communicated by A. Jamie Cuticchia
West Riding Medical Research Trust
ark:/67375/WNG-VXCFRVLW-D
ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
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ISSN:1059-7794
1098-1004
DOI:10.1002/humu.20383