Small molecule hydration energy and entropy from 3D-RISM

Implicit solvent models offer an attractive way to estimate the effects of a solvent environment on the properties of small or large solutes without the complications of explicit simulations. One common test of accuracy is to compute the free energy of transfer from gas to liquid for a variety of sm...

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Published inJournal of physics. Condensed matter Vol. 28; no. 34; p. 344002
Main Authors Johnson, J, Case, D A, Yamazaki, T, Gusarov, S, Kovalenko, A, Luchko, T
Format Journal Article
LanguageEnglish
Published England IOP Publishing 01.09.2016
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Summary:Implicit solvent models offer an attractive way to estimate the effects of a solvent environment on the properties of small or large solutes without the complications of explicit simulations. One common test of accuracy is to compute the free energy of transfer from gas to liquid for a variety of small molecules, since many of these values have been measured. Studies of the temperature dependence of these values (i.e. solvation enthalpies and entropies) can provide additional insights into the performance of implicit solvent models. Here, we show how to compute temperature derivatives of hydration free energies for the 3D-RISM integral equation approach. We have computed hydration free energies of 1123 small drug-like molecules (both neutral and charged). Temperature derivatives were also used to calculate hydration energies and entropies of 74 of these molecules (both neutral and charged) for which experimental data is available. While direct results have rather poor agreement with experiment, we have found that several previously proposed linear hydration free energy correction schemes give good agreement with experiment. These corrections also provide good agreement for hydration energies and entropies though simple extensions are required in some cases.
Bibliography:JPCM-106577.R1
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ISSN:0953-8984
1361-648X
DOI:10.1088/0953-8984/28/34/344002