The crystal structure of a major allergen from plants

• Published in: Structure (London) Vol. 5; no. 1; pp. 19 - 32
• Main Authors: Thorn, Kurt S, Christensen, Hans EM, Shigeta, Ron, Huddler, Don, Shalaby, Lamaat, Lindberg, Uno, Chua, Nam-Hai, Schutt, Clarence E
• Format: Journal Article
• Language: English
• Published: United States Elsevier Inc 15.01.1997
• Subjects: actin binding; Actins - chemistry; Actins - metabolism; Allergens - chemistry; Allergens - immunology; Allergens - pharmacology; allergies; Amino Acid Sequence; Arabidopsis - chemistry; Arabidopsis Proteins; Arabidopsis thaliana; Binding Sites; Conserved Sequence - genetics; Contractile Proteins; Crystallography, X-Ray; Hydrogen Bonding; Immunoglobulin E - chemistry; Immunoglobulin E - immunology; MAD; Medicin och hälsovetenskap; Microfilament Proteins - chemistry; Microfilament Proteins - classification; Microfilament Proteins - metabolism; Models, Molecular; Molecular Sequence Data; Peptides - chemistry; Peptides - metabolism; plant profilin; Plant Proteins - chemistry; Pollen - immunology; Pollen - metabolism; poly- L-proline binding; Profilins; Protein Structure, Secondary; Protein Structure, Tertiary; Rhinitis, Allergic, Seasonal - metabolism; Sequence Homology, Amino Acid; Water - metabolism; allergies; Arabidopsis thaliana; MAD; plant profilin; actin binding; poly- L-proline binding
• ISSN: 0969-2126; 1878-4186
• DOI: 10.1016/S0969-2126(97)00163-9

Background: Profilins are small eukaryotic proteins involved in modulating the assembly of actin microfilaments in the cytoplasm. They are able to bind both phosphatidylinositol-4,5-bisphosphate and poly- L-proline (PLP) and thus play a critical role in signaling pathways. Plant profilins are of interest because immunological cross-reactivity between pollen and human profilin may be the cause of hay fever and broad allergies to pollens. Results: The determination of the Arabidopsis thaliana profilin isoform I structure, using multiwavelength anomalous diffraction (MAD) to obtain structure-factor phases, is reported here. The structure of Arabidopsis profilin is similar to that of previously determined profilin structures. Conserved amino acid residues in profilins from plants, mammals, and lower eukaryotes are critically important in dictating the geometry of the PLP-binding site and the overall polypeptide fold. The main feature distinguishing plant profilins from other profilins is a solvent-filled pocket located in the most variable region of the fold. Conclusions: Comparison of the structures of SH3 domains with those of profilins from three distinct sources suggests that the mode of PLP binding may be similar. A comparison of three profilin structures from different families reveals only partial conservation of the actin-binding surface. The proximity of the semi-conserved actin-binding site and the binding pocket characteristic of plant profilins suggests that epitopes encompassing both features are responsible for the cross-reactivity of antibodies between human and plant profilins thought to be responsible for type I allergies.