Presence of human non-polio enterovirus and parechovirus genotypes in an Amsterdam hospital in 2007 to 2011 compared to national and international published surveillance data: a comprehensive review

• Published in: Euro surveillance : bulletin européen sur les maladies transmissibles Vol. 19; no. 46
• Main Authors: Janes, V A, Minnaar, R, Koen, G, van Eijk, H, Dijkman-de Haan, K, Pajkrt, D, Wolthers, K C, Benschop, K S
• Format: Journal Article
• Language: English
• Published: Sweden 20.11.2014
• Subjects: Cerebrospinal Fluid - virology; Enterovirus - genetics; Enterovirus - isolation & purification; Enterovirus Infections - diagnosis; Enterovirus Infections - virology; Feces - virology; Genotype; Humans; Netherlands; Parechovirus - genetics; Parechovirus - isolation & purification; Picornaviridae Infections - diagnosis; Picornaviridae Infections - virology; Population Surveillance; Reverse Transcriptase Polymerase Chain Reaction; Sequence Analysis, DNA; Tertiary Care Centers; Netherlands
• ISSN: 1560-7917; 1560-7917
• DOI: 10.2807/1560-7917.es2014.19.46.20964

Enteroviruses (EV) and human parechoviruses (HPeV) are endemic worldwide. These infections are a constant cause of hospitalisation and severe disease, predominantly in young children and infants. Coordinated monitoring and surveillance are crucial to control these infections. We have monitored EV and HPeV epidemiology in Amsterdam from 2007 to 2011 with real-time RT-PCR and direct genotyping, facilitating highly sensitive surveillance. Moreover, we conducted a literature survey of existing surveillance data for comparison. Only 14 studies were identified. While HPeV1 was most frequently detected in Amsterdam, EV-B viruses dominated nationally and internationally. Furthermore, the top 10 strains detected differed yearly and per study. However, detection and typing methods were too varied to allow direct comparison and comprehension of the worldwide distribution and circulation patterns of the different genotypes. This limited a direct response to anticipate peaks. Uniform European monitoring programmes are essential to aid prediction of outbreaks and disease management.