Sequencing and analysis of the complete mitochondrial genome of Eothenomys eleusis Thomas 1911 from China and its phylogenetic analysis

The complete mitogenome sequence of Eothenomys eleusis Thomas 1911 was determined using PCR. A circular double-stranded structure makes up the mitochondrial genome of E. eleusis. The complete length of the mitochondrial genome is 16,419 bp. The mitochondrial genome of E. eleusis included 13 protein-...

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Published inMitochondrial DNA. Part B. Resources Vol. 8; no. 4; pp. 493 - 496
Main Authors Zhu, Liu, Bi, Zhong-Dan, Qian, Hong-An, Mei, Xiu-Feng, Zhao, Jing-Yu, Zhao, Xin-Xu, Chen, Huan, Zhang, Jun-Sheng, Piao, Zhong-Wan
Format Journal Article
LanguageEnglish
Published England Taylor & Francis 03.04.2023
Taylor & Francis Ltd
Taylor & Francis Group
Subjects
Base composition
Bats
Eothenomys
Eothenomys eleusi
Genes
Genomes
Laboratory animals
Life sciences
Maximum likelihood method
Mitochondria
Mitochondrial DNA
Mitogenome
Mitogenome Announcement
Morphology
phylogenetic trees
Phylogenetics
Phylogeny
Proteins
Replication origins
rRNA
Software
Transfer RNA
tRNA
Mitogenome
phylogenetic trees
Eothenomys eleusi
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Summary:The complete mitogenome sequence of Eothenomys eleusis Thomas 1911 was determined using PCR. A circular double-stranded structure makes up the mitochondrial genome of E. eleusis. The complete length of the mitochondrial genome is 16,419 bp. The mitochondrial genome of E. eleusis included 13 protein-coding genes, 1 control region, 22 tRNA genes, 2 rRNA genes and 1 origin of L strand replication. The total base composition of E. eleusis mitochondrial genome was A (32.6%), T (26.3%), G (13.6%) and C (27.5%). We found significant A-T skew in base composition, especially in control regions and protein-coding genes. E. eleusis was supported by bootstrap values of 100%. This study verifies the evolutionary status of E. eleusis in Myodini tribe of Cricetidae at the molecular level. The mitochondrial genome would be a significant supplement for the E. eleusis genetic background.
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Supplemental data for this article can be accessed online at https://doi.org/10.1080/23802359.2023.2197087.
ISSN:2380-2359
2380-2359
DOI:10.1080/23802359.2023.2197087