Nitric oxide synthase-guided genome mining identifies a cytochrome P450 enzyme for olefin nitration in bacterial specialized metabolism

• Published in: Synthetic and systems biotechnology Vol. 9; no. 1; pp. 127 - 133
• Main Authors: Li, Hu, Li, Wei, Song, Kaihui, Liu, Yu, Zhao, Guiyun, Du, Yi-Ling
• Format: Journal Article
• Language: English
• Published: China Elsevier B.V 01.03.2024; KeAi Publishing Communications Ltd; KeAi Publishing; KeAi Communications Co., Ltd
• Subjects: Antibiotics; Biocatalysts; Bioinformatics; Biosynthesis; Cytochrome; Cytochrome P450; Cytochromes P450; DNA methylation; E coli; Enzymes; Gene clusters; Genes; Genome mining; Genomes; Genomics; In vivo methods and tests; Metabolic pathways; Metabolism; Metabolites; Microorganisms; Natural products; Nitrates; Nitration; Nitric oxide; Nitric-oxide synthase; P450; Plasmids; Protein expression; Proteins; Cytochrome; Nitration; Biosynthesis; P450; Nitric oxide; Genome mining
• ISSN: 2405-805X; 2405-805X
• DOI: 10.1016/j.synbio.2024.01.005

The biological signaling molecule nitric oxide (NO) has recently emerged as a metabolic precursor for the creation of microbial natural products with diversified structures and biological activities. Within the biosynthetic gene clusters (BGCs) of these compounds, genes associated with NO production pathways have been pinpointed. In this study, we employ a nitric oxide synthase (NOS)-guided genome mining strategy for the targeted discovery of NO-derived bacterial natural products and NO-utilizing biocatalysts. We show that a conserved NOS-containing BGC, distributed across several actinobacterial genomes, is responsible for the biosynthesis of lajollamycin, a unique nitro-tetraene-containing antibiotic whose biosynthetic mechanism remains elusive. Through a combination of in vivo and in vitro studies, we unveil the first cytochrome P450 enzyme capable of catalyzing olefin nitration in natural product biosynthesis. These results not only expand the current knowledge about biosynthetic nitration processes but also offer an efficient way for targeted identification of NO-utilizing metabolic pathways and novel nitrating biocatalysts.