ProTrack: An Interactive Multi‐Omics Data Browser for Proteogenomic Studies

The Clinical Proteomic Tumor Analysis Consortium (CPTAC) initiative has generated extensive multi‐omics data resources of deep proteogenomic profiles for multiple cancer types. To enable the broader community of biological and medical researchers to intuitively query, explore, and download data and...

Full description

Saved in:
Bibliographic Details
Published inProteomics (Weinheim) Vol. 20; no. 21-22; pp. e1900359 - n/a
Main Authors Calinawan, Anna Pamela, Song, Xiaoyu, Ji, Jiayi, Dhanasekaran, Saravana Mohan, Petralia, Francesca, Wang, Pei, Reva, Boris
Format Journal Article
LanguageEnglish
Published Weinheim Wiley Subscription Services, Inc 01.11.2020
Subjects
Applications programs
Cancer
Clear cell-type renal cell carcinoma
Consortia
Depth profiling
Kidney cancer
Medical research
Online AccessGet full text

Cover

More Information
Summary:The Clinical Proteomic Tumor Analysis Consortium (CPTAC) initiative has generated extensive multi‐omics data resources of deep proteogenomic profiles for multiple cancer types. To enable the broader community of biological and medical researchers to intuitively query, explore, and download data and analysis results from various CPTAC projects, a prototype user‐friendly web application called “ProTrack” is built with the CPTAC clear cell renal cell carcinoma (ccRCC) data set (http://ccrcc.cptac-data-view.org). Here the salient features of this application which provides a dynamic, comprehensive, and granular visualization of the rich proteogenomic data is described.
Bibliography:ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 23
ISSN:1615-9853
1615-9861
DOI:10.1002/pmic.201900359