New insights about the EptA protein and its correlation with the pmrC gene in polymyxin resistance in Pseudomonas aeruginosa

• Published in: Current research in microbial sciences Vol. 2; p. 100042
• Main Authors: Freire, Cindy Magda Araújo dos Santos, Taunay-Rodrigues, Alessandro, Gonzatti, Michelangelo Bauwelz, Fonseca, Fátima Morgana Pio, Freire, José Ednésio da Cruz
• Format: Journal Article
• Language: English
• Published: Elsevier B.V 01.12.2021; Elsevier
• Subjects: Bacterial resistance; Computational biology; Gram-negative bacteria; Polymyxin; Research Paper; Bacterial resistance; Gram-negative bacteria; Polymyxin; Computational biology
• ISSN: 2666-5174; 2666-5174
• DOI: 10.1016/j.crmicr.2021.100042

•Computational biology.•Bacterial resistance.•Pseudomonas aeruginosa.•Gram-negative bacteria.•Polymyxin. Nowadays, clinical and scientific interest in antibiotics, as polymyxin, has increased due to the large number of reports of multiresistant Gram-negative bacteria, as Pseudomonas aeruginosa. The aim of this study was to investigate a related group of proteins for resistance to polymyxins, encoded by P. aeruginosa genome, through in silico analysis. The mobilized colistin resistance 1 (MCR1) protein from Escherichia coli was used for comparison. Similar sequences to the protein MCR1 in P. aeruginosa were analysed for physicochemical properties. 31 protein isoforms in P. aeruginosa (EptA) were found able to confer resistance to polymyxin showing protein lengths between 551 and 572 amino acids, with molecular mass values between 61.36 - 62. 80 kDa, isoelectric point between 6.10 to 7.17, instability index between 33.76 to 41.87, aliphatic index between 98.67 to 102.63 and the hydropathyindex between - 0.008 to 0.094. These proteins belong to the DUF1705 superfamily with bit-score values between 559.81 and 629.78. A high degree of similarity between EpTAs in P. aeruginosa was observed in relation to other proteins that confer resistance to polymyxins, present in Gram-negative bacteria species of clinical interest. Although, further studies are needed to identify the actual contribution of EptAs in P. aeruginosa species.