Toxin Kid uncouples DNA replication and cell division to enforce retention of plasmid R1 in Escherichia coli cells

• Published in: Proceedings of the National Academy of Sciences - PNAS Vol. 111; no. 7; pp. 2734 - 2739
• Main Authors: Pimentel, Belén, Nair, Radhika, Bermejo-Rodríguez, Camino, Preston, Mark A., Agu, Chukwuma A., Wang, Xindan, Bernal, Juan A., Sherratt, David J., de la Cueva-Méndez, Guillermo
• Format: Journal Article
• Language: English
• Published: United States National Academy of Sciences 18.02.2014; National Acad Sciences
• Subjects: Bacteria; Base Sequence; Biological Sciences; Blotting, Western; Cell division; Cell Division - physiology; Cell growth; Cell membranes; Daughter cells; Deoxyribonucleic acid; DNA; DNA Replication - physiology; Drug Resistance, Bacterial - genetics; Drug Resistance, Bacterial - physiology; E coli; Escherichia coli; Escherichia coli - genetics; Escherichia coli - physiology; Escherichia coli Proteins - metabolism; Messenger RNA; Microscopy, Electron; Molecular Sequence Data; Oligonucleotides - genetics; Pathogens; Phenotypes; Plasmids; R Factors - metabolism; R Factors - physiology; Sequence Analysis, DNA; Toxicity; Toxins; plasmid stability; mRNA interferase; PemK; parD; RNase
• ISSN: 0027-8424; 1091-6490
• DOI: 10.1073/pnas.1308241111

Worldwide dissemination of antibiotic resistance in bacteria is facilitated by plasmids that encode postsegregational killing (PSK) systems. These produce a stable toxin (T) and a labile antitoxin (A) conditioning cell survival to plasmid maintenance, because only this ensures neutralization of toxicity. Shortage of antibiotic alternatives and the link of TA pairs to PSK have stimulated the opinion that premature toxin activation could be used to kill these recalcitrant organisms in the clinic. However, validation of TA pairs as therapeutic targets requires unambiguous understanding of their mode of action, consequences for cell viability, and function in plasmids. Conflicting with widespread notions concerning these issues, we had proposed that the TA pair kis-kid (killing suppressor-killing determinant) might function as a plasmid rescue system and not as a PSK system, but this remained to be validated. Here, we aimed to clarify unsettled mechanistic aspects of Kid activation, and of the effects of this for kis-kid–bearing plasmids and their host cells. We confirm that activation of Kid occurs in cells that are about to lose the toxin-encoding plasmid, and we show that this provokes highly selective restriction of protein outputs that inhibits cell division temporarily, avoiding plasmid loss, and stimulates DNA replication, promoting plasmid rescue. Kis and Kid are conserved in plasmids encoding multiple antibiotic resistance genes, including extended spectrum β-lactamases, for which therapeutic options are scarce, and our findings advise against the activation of this TA pair to fight pathogens carrying these extrachromosomal DNAs.