Two RING-Finger Ubiquitin E3 Ligases Regulate the Degradation of SPX4, An Internal Phosphate Sensor, for Phosphate Homeostasis and Signaling in Rice

• Published in: Molecular plant Vol. 12; no. 8; pp. 1060 - 1074
• Main Authors: Ruan, Wenyuan, Guo, Meina, Wang, Xueqing, Guo, Zhenhui, Xu, Zhuang, Xu, Lei, Zhao, Hongyu, Sun, Haiji, Yan, Chengqi, Yi, Keke
• Format: Journal Article
• Language: English
• Published: England Elsevier Inc 05.08.2019
• Subjects: cytoplasm; enzyme activity; eukaryotic cells; Gene Expression Regulation, Plant - genetics; Homeostasis; loss-of-function mutation; lysine; mutants; Oryza - genetics; phosphate regulation network; phosphates; PHR2; Pi homeostasis; Pi signaling; Plant Proteins - genetics; Plant Proteins - metabolism; rice; SPX4; two hybrid system techniques; ubiquitin; ubiquitin-protein ligase; Ubiquitin-Protein Ligases - genetics; Ubiquitin-Protein Ligases - metabolism; ubiquitination; Ubiquitination - genetics; Ubiquitination - physiology; ubiquitination; Pi signaling; Pi homeostasis; phosphate regulation network; rice; PHR2; SPX4
• ISSN: 1674-2052; 1752-9867; 1752-9867
• DOI: 10.1016/j.molp.2019.04.003

SPX-domain-containing proteins (SPXs) play an important role in inorganic phosphate (Pi) sensing, signaling, and transport in eukaryotes. In plants, SPXs are known to integrate cellular Pi status and negatively regulate the activity of Pi central regulators, the PHOSPATE STARVATION RESPONSE proteins (PHRs). The stability of SPXs, such as SPX4, is reduced under Pi-deficient conditions. However, the mechanisms by which SPXs are degraded remain unclear. In this study, using a yeast-two-hybrid screen we identified two RING-finger ubiquitin E3 ligases regulating SPX4 degradation, designated SDEL1 and SDEL2, which were post-transcriptionally induced by Pi starvation. We found that both SDELs were located in the nucleus and cytoplasm, had ubiquitin E3 ligase activity, and directly ubiquitinated the K213 and K299 lysine residues in SPX4 to regulate its stability. Furthermore, we found that PHR2, a Pi central regulator in rice, could compete with SDELs by interacting with SPX4 under Pi-sufficient conditions, which protected SPX4 from ubiquitination and degradation. Consistent with the biochemical function of SDEL1 and SDEL2, overexpression of SDEL1 or SDEL2 resulted in Pi overaccumulation and induced Pi-starvation signaling even under Pi-sufficient conditions. Conversely, their loss-of-function mutants displayed decreased Pi accumulation and reduced Pi-starvation signaling. Collectively, our study revealed that SDEL1 and SDEL2 facilitate the degradation of SPX4 to modulate PHR2 activity and regulate Pi homeostasis and Pi signaling in response to external Pi availability in rice. SPX4, an internal Pi sensor, interacts with PHR2, a central regulator of Pi signaling, and regulates its activity. This study identified two RING-finger ubiquitin E3 ligases, which promote the degradation of SPX4 and thus modulate PHR2 activity for Pi homeostasis and Pi signaling in response to external Pi availability in rice.