Novel insights into cyclooxygenases, linoleate diol synthases, and lipoxygenases from deuterium kinetic isotope effects and oxidation of substrate analogs

• Published in: Biochimica et biophysica acta Vol. 1821; no. 12; pp. 1508 - 1517
• Main Authors: Hoffmann, Inga, Hamberg, Mats, Lindh, Roland, Oliw, Ernst H.
• Format: Journal Article
• Language: English
• Published: Netherlands Elsevier B.V 01.12.2012
• Subjects: Animal heme peroxidase; Biocatalysis; Biochemical Pharmacology; Biokemisk farmakologi; Chiral phase HPLC; Chromatography, Liquid; deuterium; Deuterium - chemistry; Deuterium - metabolism; Fatty acid oxygenation; fatty acids; Fatty Acids, Unsaturated - chemistry; Fatty Acids, Unsaturated - metabolism; iron; Isomerism; isomers; isotopes; Kinetic isotope effect; Kinetics; Lipoxygenases - metabolism; Mass Spectrometry; Models, Chemical; Molecular Structure; oxidation; Oxidation-Reduction; oxygen; Oxygen - metabolism; Oxygenases - metabolism; Oxygenation mechanism; prostaglandin synthase; Prostaglandin-Endoperoxide Synthases - metabolism; soybeans; Substrate Specificity; Time Factors; NP; HPOME; HPEME; Fatty acid oxygenation; D-KIE; Animal heme peroxidase; HETE; sLOX; LDS; MS; HODE; [11R-2H] (9Z,12E)18:2; DOX; CP; COX; TIC; PGH; Kinetic isotope effect; HEME; LOX; RSV; Oxygenation mechanism; LC; Chiral phase HPLC; Mass spectrometry; HOME; RP
• ISSN: 1388-1981; 0006-3002; 1879-2618; 1879-2618
• DOI: 10.1016/j.bbalip.2012.09.001

Cyclooxygenases (COX) and 8R-dioxygenase (8R-DOX) activities of linoleate diol synthases (LDS) are homologous heme-dependent enzymes that oxygenate fatty acids by a tyrosyl radical-mediated hydrogen abstraction and antarafacial insertion of O2. Soybean lipoxygenase-1 (sLOX-1) contains non-heme iron and oxidizes 18:2n−6 with a large deuterium kinetic isotope effect (D-KIE). The aim of the present work was to obtain further mechanistic insight into the action of these enzymes by using a series of n−6 and n−9 fatty acids and by analysis of D-KIE. COX-1 oxidized C20 and C18 fatty acids in the following order of rates: 20:2n−6>20:1n−6>20:3n−9>20:1n−9 and 18:3n−3≥18:2n−6>18:1n−6. 18:2n−6 and its geometrical isomer (9E,12Z)18:2 were both mainly oxygenated at C-9 by COX-1, but the 9Z,12E isomer was mostly oxygenated at C-13. A cis-configured double bond in the n−6 position therefore seems important for substrate positioning. 8R-DOX oxidized (9Z,12E)18:2 at C-8 in analogy with 18:2n−6, but the 9E,12Z isomer was mainly subject to hydrogen abstraction at C-11 and oxygen insertion at C-9 by 8R-DOX of 5,8-LDS. sLOX-1 and 13R-MnLOX oxidized [11S-2H]18:2n−6 with similar D-KIE (~53), which implies that the catalytic metals did not alter the D-KIE. Oxygenation of 18:2n−6 by COX-1 and COX-2 took place with a D-KIE of 3–5 as probed by incubations of [11,11-2H2]- and [11S-2H]18:2n−6. In contrast, the more energetically demanding hydrogen abstractions of the allylic carbons of 20:1n−6 by COX-1 and 18:1n−9 by 8R-DOX were both accompanied by large D-KIE (>20). ► Deuterium kinetic isotope effect (D-KIE) larger than 20 can be explained by hydrogen tunneling. ► Fe- and Mn-LOX oxidize bis-allylic carbons with large D-KIE (>50) and COX-1 with small (D-KIE<4). ► COX-1 and 8R-DOX oxidize allylic carbons efficiently, but with large D-KIE (>20). ► Hydrogen tunneling contributes to reaction rates of energetically demanding enzymatic reactions.