Identification of novel alpha- and gammaherpesviruses from cutaneous and mucosal lesions of dolphins and whales

• Published in: Journal of virological methods Vol. 136; no. 1; pp. 261 - 266
• Main Authors: Smolarek Benson, Kara A., Manire, Charles A., Ewing, Ruth Y., Saliki, Jeremiah T., Townsend, Forrest I., Ehlers, Bernhard, Romero, Carlos H.
• Format: Journal Article
• Language: English
• Published: London Elsevier B.V 01.09.2006; Amsterdam Elsevier; New York, NY
• Subjects: Alphaherpesvirinae; Amino Acid Sequence; Animals; Biological and medical sciences; Cetaceae; DNA, Viral - analysis; DNA, Viral - genetics; Dolphins - virology; Fundamental and applied biological sciences. Psychology; Gammaherpesvirinae; Grampus griseus; Herpes simplex virus; Herpesviridae - classification; Herpesviridae - genetics; Herpesviridae - isolation & purification; Herpesvirus; Kogia sima; Mesoplodon densirostris; Microbiology; Molecular identification; Molecular Sequence Data; Mucous Membrane - virology; Phylogeny; Polymerase Chain Reaction - methods; Sequence Analysis, DNA; Sequence Homology; Skin Diseases, Viral - veterinary; Techniques used in virology; Tursiops truncatus; Virology; Virus Diseases - veterinary; Whales - virology; Gammaherpesvirinae; Cetaceae; Alphaherpesvirinae; Molecular identification; Herpesvirus; Skin disease; Microbiology; Herpesviridae; Mucosa; Identification; Method; Virology; Virus
• ISSN: 0166-0934; 1879-0984
• DOI: 10.1016/j.jviromet.2006.03.033

Total DNA extracted from mucosal and skin lesions of captive and stranded cetaceans was analyzed for herpesvirus DNA by nested and direct polymerase chain reactions (PCR). The targeted sequences corresponded to a region of the DNA polymerase gene containing multiple conserved amino acid motifs. Herpesvirus genomic DNA fragments (222–244 bp) were amplified from 11 lesions by nested PCR and from eight lesions (∼730 bp) using direct PCR from US cetaceans. Fragments of various sizes were also amplified from skin, spleen and blood of a German dolphin. Sequencing and BLAST analysis of these DNA fragments indicated that alpha- or gammaherpesviruses were present in the cetacean lesions. Alphaherpesviruses were associated with skin lesions of three Atlantic bottlenose dolphins ( Tursiops truncatus), while gammaherpesviruses were present in genital lesions of five Atlantic bottlenose dolphins, one Risso's dolphin ( Grampus griseus), one dwarf sperm whale ( Kogia sima) and one Blainville's beaked whale ( Mesoplodon densirostris), as well as in one oral lesion from an Atlantic bottlenose dolphin. Phylogenetic analysis of deduced amino acid sequences showed that the cetacean alphaherpesviruses were most closely related to human alphaherpesviruses, namely, herpes simplex-1 and -2. On the other hand, cetacean gammaherpesviruses were most closely related to Rhadinoviruses. These novel cetacean herpesviruses appeared to be distinct from known herpesviruses of marine and terrestrial vertebrates. The sequencing data strongly suggest that these viruses are most likely cetacean specific and possibly have coevolved with their cetacean hosts.