Transcriptomics of MASLD Pathobiology in African American Patients in the Washington DC Area

• Published in: International journal of molecular sciences Vol. 24; no. 23; p. 16654
• Main Authors: Mondal, Tanmoy, Smith, Coleman I, Loffredo, Christopher A, Quartey, Ruth, Moses, Gemeyel, Howell, Charles D, Korba, Brent, Kwabi-Addo, Bernard, Nunlee-Bland, Gail, R Rucker, Leanna, Johnson, Jheannelle, Ghosh, Somiranjan
• Format: Journal Article
• Language: English
• Published: Switzerland MDPI AG 01.12.2023
• Subjects: African Americans; Biopsy; Black or African American - genetics; Cell death; Connective tissue; Development and progression; Estrogens; Fatty Liver; Gallbladder diseases; Gene expression; Gene Expression Profiling; Genes; Health maintenance organizations; Humans; Hypertension; International economic relations; Liver cancer; Liver diseases; Liver Neoplasms; MASLD; Metabolic Diseases; Metabolism; Morphology; NAFLD; pathophysiology; Physiology; Pilot Projects; Systems development; transcriptomic analysis; Type 2 diabetes; Washington DC; United States > US; African Americans; transcriptomic analysis; NAFLD; MASLD; pathophysiology
• ISSN: 1422-0067; 1661-6596; 1422-0067
• DOI: 10.3390/ijms242316654

Metabolic-dysfunction-associated steatotic liver disease (MASLD) is becoming the most common chronic liver disease worldwide and is of concern among African Americans (AA) in the United States. This pilot study evaluated the differential gene expressions and identified the signature genes in the disease pathways of AA individuals with MASLD. Blood samples were obtained from MASLD patients ( = 23) and non-MASLD controls ( = 24) along with their sociodemographic and medical details. Whole-blood transcriptomic analysis was carried out using Affymetrix Clarion-S Assay. A validation study was performed utilizing TaqMan Arrays coupled with Ingenuity Pathway Analysis (IPA) to identify the major disease pathways. Out of 21,448 genes in total, 535 genes (2.5%) were significantly ( < 0.05) and differentially expressed when we compared the cases and controls. A significant overlap in the predominant differentially expressed genes and pathways identified in previous studies using hepatic tissue was observed. Of note, and genes were upregulated, and was downregulated significantly. is the top canonical pathway, and its corresponding biofunction contributes to the development of . The findings address the knowledge gaps regarding how signature genes and functional pathways can be detected in blood samples ('liquid biopsy') in AA MASLD patients, demonstrating the potential of the blood samples as an alternative non-invasive source of material for future studies.