Residues in the N-Terminal Domain of MutL Required for Mismatch Repair in Bacillus subtilis

• Published in: Journal of Bacteriology Vol. 194; no. 19; pp. 5361 - 5367
• Main Authors: Bolz, Nicholas J, Lenhart, Justin S, Weindorf, Steven C, Simmons, Lyle A
• Format: Journal Article
• Language: English
• Published: Washington, DC American Society for Microbiology 01.10.2012
• Subjects: Adenosine Triphosphatases - genetics; Adenosine Triphosphatases - metabolism; adenosine triphosphate; adenosinetriphosphatase; alleles; Amino Acid Sequence; Bacillus subtilis; Bacillus subtilis - genetics; Bacillus subtilis - metabolism; bacteria; Bacterial Proteins - genetics; Bacterial Proteins - metabolism; Bacteriology; Base Pair Mismatch - genetics; Binding sites; Biological and medical sciences; colorectal neoplasms; Deoxyribonucleic acid; DNA; DNA Mismatch Repair - physiology; DNA repair; DNA-directed DNA polymerase; Enzyme kinetics; Fundamental and applied biological sciences. Psychology; Gene Expression Regulation, Bacterial - physiology; Gene Expression Regulation, Enzymologic; Genomic Instability; Gram-positive bacteria; humans; Microbiology; Miscellaneous; missense mutation; Models, Molecular; Molecular Sequence Data; mutants; Mutation; patients; Protein Conformation; proteins; Bacteria; Bacillales; Bacillaceae; Repair; Bacillus subtilis
• ISSN: 0021-9193; 1098-5530; 1067-8832
• DOI: 10.1128/JB.01142-12

Mismatch repair is a highly conserved pathway responsible for correcting DNA polymerase errors incorporated during genome replication. MutL is a mismatch repair protein known to coordinate several steps in repair that ultimately results in strand removal following mismatch identification by MutS. MutL homologs from bacteria to humans contain well-conserved N-terminal and C-terminal domains. To understand the contribution of the MutL N-terminal domain to mismatch repair, we analyzed 14 different missense mutations in Bacillus subtilis MutL that were conserved with missense mutations identified in the human MutL homolog MLH1 from patients with hereditary nonpolyposis colorectal cancer (HNPCC). We characterized missense mutations in or near motifs important for ATP binding, ATPase activity, and DNA binding. We found that 13 of the 14 missense mutations conferred a substantial defect to mismatch repair in vivo, while three mutant alleles showed a dominant negative increase in mutation frequency to wild-type mutL. We performed immunoblot analysis to determine the relative stability of each mutant protein in vivo and found that, although most accumulated, several mutant proteins failed to maintain wild-type levels, suggesting defects in protein stability. The remaining missense mutations located in areas of the protein important for DNA binding, ATP binding, and ATPase activities of MutL compromised repair in vivo. Our results define functional residues in the N-terminal domain of B. subtilis MutL that are critical for mismatch repair in vivo.