Gene expression changes in HLA mismatched mixed lymphocyte cultures reveal genes associated with allorecognition

Human leucocyte antigen (HLA) compatibility is the main factor determining the occurrence of graft‐vs‐host disease (GVHD) in patients. It has also been shown that minor histocompatibility antigen differences as well as genetic polymorphisms that are not sequenced by standard methodology for HLA typi...

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Published inTissue antigens Vol. 85; no. 4; pp. 267 - 277
Main Authors Nicolaidou, V., Stylianou, C., Koumas, L., Vassiliou, G. S., Bodman-Smith, K. B., Costeas, P.
Format Journal Article
LanguageEnglish
Published Oxford, UK Blackwell Publishing Ltd 01.04.2015
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Summary:Human leucocyte antigen (HLA) compatibility is the main factor determining the occurrence of graft‐vs‐host disease (GVHD) in patients. It has also been shown that minor histocompatibility antigen differences as well as genetic polymorphisms that are not sequenced by standard methodology for HLA typing can play a role. We used mixed lymphocyte cultures (MLCs) as a functional cellular test and investigated gene expression changes driven by HLA incompatibility in an effort to better understand the mechanisms involved in the disease. Gene expression profile of HLA matched and HLA mismatched MLC identified differentially regulated genes and pathways. We found that a great number of genes related to immune function were differentially regulated; these genes were also found to be associated with GVHD and graft rejection. The majority of differentially regulated genes were interferon‐gamma (IFNγ)‐inducible genes and IFNγ neutralisation in MLCs abrogated their induction. The microRNA‐155, a recently identified target for acute GVHD (aGVHD), was also found to be significantly induced in HLA mismatched MLC but not in the matched setting and its induction was not diminished by blocking IFNγ. In this proof‐of‐principle study we show gene expression changes in mismatched MLC that represent alloreactive responses, correlate with markers involved in GVHD and can potentially be useful in the study of the biological processes involved in this disease.
Bibliography:Figure S1. Heatmap of regulated genes in mismatched and matched mixed lymphocyte culture (MLC).Figure S2. Directional response of IDO, CCL8, CXCL9 and CXCL10 in mixed lymphocyte culture (MLC).Figure S3. Interferon-gamma (IFNγ) induction of IDO and MIR155HG.Table S1. Human leucocyte antigen (HLA) types of graft-vs-host disease (GVHD) study.Table S2. Human leucocyte antigen (HLA) types of directional mixed lymphocyte culture (MLC).Table S3. Upregulated genes in matched vs mismatched mixed lymphocyte culture (MLC).Table S4. Downregulated genes in matched vs mismatched mixed lymphocyte culture (MLC).Table S5. Association of IDO1, CXCL9, CXCL10, CLL8 and miR-155 with graft-vs-host disease (GVHD).
ark:/67375/WNG-Z30TW0D9-Q
Research Promotion Foundation of Cyprus
ArticleID:TAN12543
istex:147A9F290ABA9016D89BDFC3F61C7B16458DFB07
European Regional Development Fund
ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 23
These authors contributed equally to this work.
The copyright line for this article was changed on 23 September 2016 after original online publication.
ISSN:0001-2815
1399-0039
DOI:10.1111/tan.12543