Genotyping-by-Sequencing in Vigna unguiculata Landraces and Its Utility for Assessing Taxonomic Relationships

• Published in: Plants (Basel) Vol. 10; no. 3; p. 509
• Main Authors: Zuluaga, Diana Lucia, Lioi, Lucia, Delvento, Chiara, Pavan, Stefano, Sonnante, Gabriella
• Format: Journal Article
• Language: English
• Published: Switzerland MDPI AG 09.03.2021; MDPI
• Subjects: Asparagus; Clustering; cowpea; Cowpeas; Datasets; Domestication; GBS; Genetic diversity; Genomes; Genotyping; Germplasm; landraces; Legumes; SNP; Species; Taxonomy; Vegetables; Vigna; Vigna taxonomy; Vigna unguiculata; Italy; Angola; Iraq; landraces; GBS; cowpea; Vigna taxonomy; SNP; Vigna unguiculata
• ISSN: 2223-7747; 2223-7747
• DOI: 10.3390/plants10030509

Genotyping by sequencing (GBS) was used to analyze relationships among cowpea and asparagus bean landraces from southern Italy and to assess the utility of this technology to study taxonomy in a wider panel, including cultigroups, subspecies, and other species. The analysis of SNPs derived from GBS highlighted that, among the cowpea landraces, the African samples were separated from the other material, while, for the Italian landraces, a certain clustering depending on seed color/pattern was observed in the dendrogram. When examining the species complex, a clear separation between the two groups of wild subspecies, i.e., the allogamous wild perennials and the perennial out/inbreds, could be observed, the former representing the more ancestral wild progenitors of . The species appeared more closely related to than to the other species analyzed.