hypothetical protein Ycf46 is involved in regulation of CO2 utilization in the cyanobacterium Synechocystis sp. PCC 6803

• Published in: Planta Vol. 241; no. 1; pp. 145 - 155
• Main Authors: Jiang, Hai-Bo, Song, Wei-Yu, Cheng, Hui-Min, Qiu, Bao-Sheng
• Format: Journal Article
• Language: English
• Published: Berlin/Heidelberg Springer-Verlag 01.01.2015; Springer Berlin Heidelberg; Springer Nature B.V
• Subjects: Agriculture; Bacterial Proteins - genetics; Bacterial Proteins - metabolism; Baits; Biomedical and Life Sciences; carbon; Carbon - metabolism; Carbon dioxide; Carbon Dioxide - metabolism; carbonate dehydratase; chloroplast genome; chloroplasts; Dissolved inorganic carbon; Ecology; Environmental stress; Forestry; Gene Expression Regulation, Bacterial; growth arrest; growth retardation; Hydrogen-Ion Concentration; Immunoprecipitation; Inactivation; Life Sciences; Mutants; Mutation; open reading frames; Operon; Original Article; phenotype; Photosynthesis; Photosynthesis - genetics; Photosynthesis - physiology; Plant Sciences; Protein Binding; proteins; Synechocystis; Synechocystis - genetics; Synechocystis - metabolism; Ycf46; Carbonic anhydrase; Inorganic carbon utilization; Cyanobacteria
• ISSN: 0032-0935; 1432-2048
• DOI: 10.1007/s00425-014-2169-0

MAIN CONCLUSION : The Ycf46 mutant of Synechocystis showed growth inhibition under low dissolved CO ₂ conditions, suggesting a role for the Ycf46 protein in the process of photosynthetic CO ₂ uptake and utilization. Hypothetical chloroplast open reading frame Ycf46 proteins are highly conserved in all cyanobacterial lineages and most algal chloroplast genomes, but their exact function is still unknown. In the cyanobacterium Synechocystis sp. PCC 6803, the Ycf46 encoding gene slr0374 is part of an operon (with slr0373 and slr0376) and responds to many environmental stresses. Transcript levels of the slr0373, slr0374 and slr0376 genes were increased under a low concentration of dissolved inorganic carbon (Cᵢ). Compared with the wild type, the mutant lacking slr0374 showed growth arrest under Cᵢ-deficient conditions but not under iron-deficient or low-light conditions. In addition, the mutant grew more slowly than the wild type under pH 6.0 conditions in which CO₂was the dominant Cᵢsource, indicating the mutant cells had weak CO₂uptake and/or utilization ability. Supplying a high concentration of CO₂(5 %, v/v) to the mutant restored its phenotype to the wild type level. The photosynthetic activity of the mutant was inhibited to a lesser extent by a carbonic anhydrase inhibitor than that of the wild type, which specifically blocked CO₂uptake. Inactivation of slr0374 decreased expression of the ecaB gene and reduced carbonic anhydrase activity. A subcellular localization assay indicated that the Ycf46 protein was soluble. By co-immunoprecipitation assay using Slr0374 as a bait-protein, potential interacting proteins in the size range of 30 kDa were identified. These results suggest that the Ycf46 protein plays a role in the regulation of photosynthesis in cyanobacteria, especially in CO₂uptake and utilization.