MRSD: a web server for Metabolic Route Search and Design

We present a tool called MRSD (Metabolic Route Search and Design) to search and design routes based on the weighted compound transform diagraph. The search submodule returns routes between a source and product compound within seconds in the network of one or multiple organisms based on data from KEG...

Full description

Saved in:
Bibliographic Details
Published inBioinformatics Vol. 27; no. 11; pp. 1581 - 1582
Main Authors Xia, Deguo, Zheng, Haoran, Liu, Zhiqiang, Li, Guisheng, Li, Jinlong, Hong, Jiong, Zhao, Kai
Format Journal Article
LanguageEnglish
Published Oxford Oxford University Press 01.06.2011
Subjects
Biological and medical sciences
Fundamental and applied biological sciences. Psychology
General aspects
Internet
Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects)
Metabolic Networks and Pathways
Software
Design
World wide web
Online AccessGet full text

Cover

More Information
Summary:We present a tool called MRSD (Metabolic Route Search and Design) to search and design routes based on the weighted compound transform diagraph. The search submodule returns routes between a source and product compound within seconds in the network of one or multiple organisms based on data from KEGG. The design submodule designs a route from an appointed compound in an interactive mode. The two complementary functions, Metabolic Route Search and Design, can be broadly used in biosynthesis, bio-pharmaceuticals and the other related fields. bioinfo.ustc.edu.cn/softwares/MRSD/.
Bibliography:ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 23
ISSN:1367-4803
1367-4811
1460-2059
DOI:10.1093/bioinformatics/btr160