Genetic Characterization of a Sheep Population in Oaxaca, Mexico: The Chocholteca Creole

• Published in: Animals (Basel) Vol. 11; no. 4; p. 1172
• Main Authors: Salinas-Rios, Teodulo, Hernández-Bautista, Jorge, Mariscal-Méndez, Araceli, Aquino-Cleto, Magaly, Martínez-Martínez, Amparo, Rodríguez-Magadán, Héctor Maximino
• Format: Journal Article
• Language: English
• Published: Switzerland MDPI AG 20.04.2021; MDPI
• Subjects: Animal populations; Animals; Chocholteca Creole; Confidence intervals; Consanguinity; Conservation; Cross-breeding; Endangered & extinct species; Equilibrium; Genetic analysis; Genetic distance; Genetic diversity; Genetic relationship; Genetic structure; Genetic variability; Genotypes; Heterozygosity; Laboratories; Meat; Microsatellites; Minority & ethnic groups; Ovis aries; Population; Population genetics; Population studies; populational substructure; Sheep; Values; Wool; Mexico; United States > US; Africa; Spain; microsatellites; populational substructure; Ovis aries; consanguinity; Chocholteca Creole
• ISSN: 2076-2615; 2076-2615
• DOI: 10.3390/ani11041172

Creole sheep in México have undergone crossbreeding, provoking the loss of genetic variability. The objective of the present study is to determine the intra-racial genetic diversity, the genetic relationship with other genotypes, and the populational substructure of the Oaxacan Creole sheep. Twenty-nine blood samples were obtained of Creole sheep of the Oaxaca Mixteca region in México. A genetic analysis was made with 41 microsatellites recommended for studies of genetic diversity in sheep. An analysis was made of genetic diversity, populational structure, and genetic distance with 27 other sheep populations. The study found 205 alleles with a range of 2 to 9 by and an effective number of 3.33. The intra-racial analysis showed a moderate genetic diversity with values of expected heterozygosity of 0.686 and observed of 0.756, a mean polymorphic information content of 0.609, and a mean coefficient of consanguinity of -0.002. In interracial genetic diversity for the coefficients of consanguinity, the values were F = 0.0774, F = 0.16993, and F = 0.10028, showing an elevated genetic distance with other creole breeds, but close to Argentine Creole, to another Creole of México and the Spanish Merino. Its genetic structure showed that it does not have any populational subdivision nor mixes with the others analyzed. It is concluded that it is a distinct and isolated population and is proposed as the creole breed "Chocholteca" for its conservation.